Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LTN1O94822 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LTN1O94822 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
LTN1O94822 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LTN1O94822 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
LTN1O94822 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC20.54■□□□□ 0.88
LTN1O94822 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
LTN1O94822 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LTN1O94822 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC20.54■□□□□ 0.88
LTN1O94822 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC20.54■□□□□ 0.88
LTN1O94822 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC20.54■□□□□ 0.88
LTN1O94822 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC20.54■□□□□ 0.88
LTN1O94822 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC20.54■□□□□ 0.88
LTN1O94822 TSACC-208ENST00000481479 741 ntTSL 2 BASIC20.54■□□□□ 0.88
LTN1O94822 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC20.54■□□□□ 0.88
LTN1O94822 AC004466.1-201ENST00000599515 1080 ntBASIC20.54■□□□□ 0.88
LTN1O94822 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
LTN1O94822 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
LTN1O94822 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC20.54■□□□□ 0.88
LTN1O94822 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
LTN1O94822 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC20.54■□□□□ 0.88
LTN1O94822 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
LTN1O94822 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.54■□□□□ 0.88
LTN1O94822 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LTN1O94822 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
LTN1O94822 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LTN1O94822 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC20.54■□□□□ 0.88
LTN1O94822 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LTN1O94822 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
LTN1O94822 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
LTN1O94822 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC20.54■□□□□ 0.88
LTN1O94822 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LTN1O94822 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC20.54■□□□□ 0.88
LTN1O94822 NUS1P3-201ENST00000423502 862 ntBASIC20.54■□□□□ 0.88
LTN1O94822 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC20.54■□□□□ 0.88
LTN1O94822 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC20.54■□□□□ 0.88
LTN1O94822 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC20.54■□□□□ 0.88
LTN1O94822 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC20.54■□□□□ 0.88
LTN1O94822 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LTN1O94822 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LTN1O94822 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LTN1O94822 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
LTN1O94822 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
LTN1O94822 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LTN1O94822 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
LTN1O94822 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC20.53■□□□□ 0.88
LTN1O94822 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
LTN1O94822 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LTN1O94822 CD8B2-202ENST00000417670 633 ntBASIC20.53■□□□□ 0.88
LTN1O94822 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
LTN1O94822 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC20.53■□□□□ 0.88
LTN1O94822 EIF4HP1-201ENST00000453115 687 ntBASIC20.53■□□□□ 0.88
LTN1O94822 AKR7A2P1-201ENST00000460134 915 ntBASIC20.53■□□□□ 0.88
LTN1O94822 AC022217.1-201ENST00000521069 738 ntBASIC20.53■□□□□ 0.88
LTN1O94822 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC20.53■□□□□ 0.88
LTN1O94822 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC20.53■□□□□ 0.88
LTN1O94822 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
LTN1O94822 PCDHA14-201ENST00000506751 2298 ntBASIC20.53■□□□□ 0.88
LTN1O94822 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LTN1O94822 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LTN1O94822 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LTN1O94822 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LTN1O94822 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC20.53■□□□□ 0.88
LTN1O94822 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LTN1O94822 AL603832.2-201ENST00000566195 2125 ntBASIC20.52■□□□□ 0.88
LTN1O94822 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC20.52■□□□□ 0.88
LTN1O94822 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC20.52■□□□□ 0.88
LTN1O94822 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LTN1O94822 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LTN1O94822 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LTN1O94822 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LTN1O94822 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LTN1O94822 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LTN1O94822 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LTN1O94822 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LTN1O94822 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC20.52■□□□□ 0.88
LTN1O94822 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC20.52■□□□□ 0.88
LTN1O94822 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC20.52■□□□□ 0.88
LTN1O94822 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC20.52■□□□□ 0.88
LTN1O94822 MIR4783-201ENST00000580343 82 ntBASIC20.52■□□□□ 0.88
LTN1O94822 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC20.52■□□□□ 0.88
LTN1O94822 OR10B1P-201ENST00000601666 907 ntBASIC20.52■□□□□ 0.88
LTN1O94822 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC20.52■□□□□ 0.88
LTN1O94822 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC20.52■□□□□ 0.88
LTN1O94822 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LTN1O94822 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LTN1O94822 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC20.52■□□□□ 0.88
LTN1O94822 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LTN1O94822 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LTN1O94822 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LTN1O94822 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
LTN1O94822 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LTN1O94822 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LTN1O94822 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC20.51■□□□□ 0.87
LTN1O94822 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LTN1O94822 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
LTN1O94822 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC20.51■□□□□ 0.87
LTN1O94822 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC20.51■□□□□ 0.87
LTN1O94822 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
LTN1O94822 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms