Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.31■□□□□ 0.04
CPNE3O75131 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPNE3O75131 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPNE3O75131 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CPNE3O75131 AC022188.1-201ENST00000620960 1664 ntBASIC15.31■□□□□ 0.04
CPNE3O75131 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPNE3O75131 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.31■□□□□ 0.04
CPNE3O75131 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPNE3O75131 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
CPNE3O75131 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.31■□□□□ 0.04
CPNE3O75131 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPNE3O75131 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPNE3O75131 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPNE3O75131 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPNE3O75131 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CPNE3O75131 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.3■□□□□ 0.04
CPNE3O75131 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.3■□□□□ 0.04
CPNE3O75131 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE3O75131 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE3O75131 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE3O75131 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE3O75131 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE3O75131 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE3O75131 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE3O75131 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.3■□□□□ 0.04
CPNE3O75131 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.3■□□□□ 0.04
CPNE3O75131 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
CPNE3O75131 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE3O75131 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE3O75131 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.3■□□□□ 0.04
CPNE3O75131 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
CPNE3O75131 GSAP-205ENST00000430584 600 ntTSL 5 BASIC15.3■□□□□ 0.04
CPNE3O75131 AL353779.1-201ENST00000434793 351 ntBASIC15.3■□□□□ 0.04
CPNE3O75131 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
CPNE3O75131 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.3■□□□□ 0.04
CPNE3O75131 RN7SL692P-201ENST00000464677 288 ntBASIC15.3■□□□□ 0.04
CPNE3O75131 SDHAP3-202ENST00000515467 728 ntBASIC15.3■□□□□ 0.04
CPNE3O75131 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CPNE3O75131 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.3■□□□□ 0.04
CPNE3O75131 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.3■□□□□ 0.04
CPNE3O75131 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.3■□□□□ 0.04
CPNE3O75131 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC15.3■□□□□ 0.04
CPNE3O75131 AC044860.1-202ENST00000559481 777 ntBASIC15.3■□□□□ 0.04
CPNE3O75131 AC140912.1-201ENST00000577171 1054 ntBASIC15.3■□□□□ 0.04
CPNE3O75131 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.3■□□□□ 0.04
CPNE3O75131 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE3O75131 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.3■□□□□ 0.04
CPNE3O75131 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE3O75131 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.3■□□□□ 0.04
CPNE3O75131 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE3O75131 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
CPNE3O75131 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE3O75131 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE3O75131 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE3O75131 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE3O75131 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CPNE3O75131 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE3O75131 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE3O75131 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CPNE3O75131 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE3O75131 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE3O75131 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE3O75131 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE3O75131 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.29■□□□□ 0.04
CPNE3O75131 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CPNE3O75131 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE3O75131 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE3O75131 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE3O75131 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
CPNE3O75131 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE3O75131 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE3O75131 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CPNE3O75131 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE3O75131 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CPNE3O75131 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE3O75131 DFFBP1-201ENST00000433250 979 ntBASIC15.29■□□□□ 0.04
CPNE3O75131 AC093004.1-201ENST00000508850 424 ntBASIC15.29■□□□□ 0.04
CPNE3O75131 DOC2GP-202ENST00000514950 1163 ntBASIC15.29■□□□□ 0.04
CPNE3O75131 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CPNE3O75131 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE3O75131 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE3O75131 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC15.29■□□□□ 0.04
CPNE3O75131 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.29■□□□□ 0.04
CPNE3O75131 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE3O75131 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.29■□□□□ 0.04
CPNE3O75131 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.29■□□□□ 0.04
CPNE3O75131 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.29■□□□□ 0.04
CPNE3O75131 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE3O75131 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.29■□□□□ 0.04
CPNE3O75131 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CPNE3O75131 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.29■□□□□ 0.04
CPNE3O75131 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE3O75131 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE3O75131 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE3O75131 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE3O75131 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CPNE3O75131 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE3O75131 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE3O75131 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE3O75131 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms