Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC14.14□□□□□ -0.15
PFDN1O60925 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PFDN1O60925 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PFDN1O60925 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC14.14□□□□□ -0.15
PFDN1O60925 Six3os1_6.1-201ENST00000620790 196 ntBASIC14.14□□□□□ -0.15
PFDN1O60925 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PFDN1O60925 CCDC92-208ENST00000545135 4883 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
PFDN1O60925 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PFDN1O60925 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PFDN1O60925 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
PFDN1O60925 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PFDN1O60925 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PFDN1O60925 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC14.14□□□□□ -0.15
PFDN1O60925 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
PFDN1O60925 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PFDN1O60925 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC14.14□□□□□ -0.15
PFDN1O60925 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PFDN1O60925 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.14□□□□□ -0.15
PFDN1O60925 MEF2D-204ENST00000464356 5598 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
PFDN1O60925 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PFDN1O60925 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC14.14□□□□□ -0.15
PFDN1O60925 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PFDN1O60925 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PFDN1O60925 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC14.13□□□□□ -0.15
PFDN1O60925 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PFDN1O60925 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PFDN1O60925 AL365181.3-201ENST00000605886 3222 ntBASIC14.13□□□□□ -0.15
PFDN1O60925 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PFDN1O60925 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
PFDN1O60925 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
PFDN1O60925 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PFDN1O60925 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.13□□□□□ -0.15
PFDN1O60925 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PFDN1O60925 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC14.13□□□□□ -0.15
PFDN1O60925 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.13□□□□□ -0.15
PFDN1O60925 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC14.13□□□□□ -0.15
PFDN1O60925 SPATA2-202ENST00000422556 4138 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
PFDN1O60925 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.13□□□□□ -0.15
PFDN1O60925 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PFDN1O60925 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.13□□□□□ -0.15
PFDN1O60925 TBC1D3P2-202ENST00000577902 1649 ntBASIC14.13□□□□□ -0.15
PFDN1O60925 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
PFDN1O60925 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
PFDN1O60925 AC004951.3-201ENST00000418645 1148 ntBASIC14.13□□□□□ -0.15
PFDN1O60925 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC14.13□□□□□ -0.15
PFDN1O60925 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC14.13□□□□□ -0.15
PFDN1O60925 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC14.13□□□□□ -0.15
PFDN1O60925 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PFDN1O60925 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC14.13□□□□□ -0.15
PFDN1O60925 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PFDN1O60925 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC14.13□□□□□ -0.15
PFDN1O60925 TMED1-207ENST00000591695 809 ntTSL 5 BASIC14.13□□□□□ -0.15
PFDN1O60925 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
PFDN1O60925 MDK-213ENST00000617138 635 ntTSL 2 BASIC14.13□□□□□ -0.15
PFDN1O60925 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
PFDN1O60925 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC14.13□□□□□ -0.15
PFDN1O60925 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC14.13□□□□□ -0.15
PFDN1O60925 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
PFDN1O60925 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PFDN1O60925 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
PFDN1O60925 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PFDN1O60925 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
PFDN1O60925 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
PFDN1O60925 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PFDN1O60925 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
PFDN1O60925 FZD7-201ENST00000286201 3859 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
PFDN1O60925 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.13□□□□□ -0.15
PFDN1O60925 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PFDN1O60925 CREBL2-201ENST00000228865 3754 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PFDN1O60925 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PFDN1O60925 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PFDN1O60925 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC14.13□□□□□ -0.15
PFDN1O60925 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PFDN1O60925 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PFDN1O60925 AC132938.5-201ENST00000624980 1813 ntBASIC14.13□□□□□ -0.15
PFDN1O60925 CACNA1C-209ENST00000399603 7377 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
PFDN1O60925 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC14.13□□□□□ -0.15
PFDN1O60925 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC14.13□□□□□ -0.15
PFDN1O60925 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PFDN1O60925 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
PFDN1O60925 GOLGA6L4-202ENST00000422563 4155 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
PFDN1O60925 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
PFDN1O60925 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
PFDN1O60925 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC14.12□□□□□ -0.15
PFDN1O60925 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC14.12□□□□□ -0.15
PFDN1O60925 DNAJB12-201ENST00000338820 4360 ntTSL 2 BASIC14.12□□□□□ -0.15
PFDN1O60925 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC14.12□□□□□ -0.15
PFDN1O60925 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PFDN1O60925 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PFDN1O60925 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
PFDN1O60925 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
PFDN1O60925 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PFDN1O60925 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PFDN1O60925 ZBED1P1-201ENST00000502364 1930 ntBASIC14.12□□□□□ -0.15
PFDN1O60925 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PFDN1O60925 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
PFDN1O60925 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
PFDN1O60925 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PFDN1O60925 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PFDN1O60925 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms