Protein–RNA interactions for Protein: O15079

SNPH, Syntaphilin, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNPHO15079 AC078925.2-201ENST00000624013 1973 ntBASIC15.3■□□□□ 0.04
SNPHO15079 AC068057.2-201ENST00000624047 895 ntBASIC15.3■□□□□ 0.04
SNPHO15079 LINC00895-201ENST00000629028 1637 ntBASIC15.3■□□□□ 0.04
SNPHO15079 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.3■□□□□ 0.04
SNPHO15079 CU459211.1-201ENST00000635667 749 ntBASIC15.3■□□□□ 0.04
SNPHO15079 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
SNPHO15079 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNPHO15079 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.3■□□□□ 0.04
SNPHO15079 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
SNPHO15079 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SNPHO15079 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SNPHO15079 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNPHO15079 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNPHO15079 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SNPHO15079 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNPHO15079 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNPHO15079 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNPHO15079 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
SNPHO15079 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SNPHO15079 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SNPHO15079 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNPHO15079 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNPHO15079 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SNPHO15079 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNPHO15079 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
SNPHO15079 AC006277.1-201ENST00000624348 1610 ntBASIC15.29■□□□□ 0.04
SNPHO15079 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNPHO15079 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.29■□□□□ 0.04
SNPHO15079 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SNPHO15079 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SNPHO15079 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNPHO15079 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNPHO15079 POLR2K-201ENST00000353107 998 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNPHO15079 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.29■□□□□ 0.04
SNPHO15079 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.29■□□□□ 0.04
SNPHO15079 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.29■□□□□ 0.04
SNPHO15079 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.29■□□□□ 0.04
SNPHO15079 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SNPHO15079 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC15.29■□□□□ 0.04
SNPHO15079 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SNPHO15079 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SNPHO15079 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.29■□□□□ 0.04
SNPHO15079 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNPHO15079 AC112191.1-201ENST00000523689 701 ntBASIC15.29■□□□□ 0.04
SNPHO15079 PTS-202ENST00000524931 696 ntTSL 3 BASIC15.29■□□□□ 0.04
SNPHO15079 PTS-204ENST00000525803 625 ntTSL 3 BASIC15.29■□□□□ 0.04
SNPHO15079 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.29■□□□□ 0.04
SNPHO15079 MTATP6P25-201ENST00000574491 261 ntBASIC15.29■□□□□ 0.04
SNPHO15079 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.29■□□□□ 0.04
SNPHO15079 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.29■□□□□ 0.04
SNPHO15079 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.29■□□□□ 0.04
SNPHO15079 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SNPHO15079 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNPHO15079 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNPHO15079 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNPHO15079 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNPHO15079 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
SNPHO15079 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.29■□□□□ 0.04
SNPHO15079 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SNPHO15079 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SNPHO15079 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SNPHO15079 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNPHO15079 AC092364.2-201ENST00000596710 2692 ntBASIC15.29■□□□□ 0.04
SNPHO15079 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.29■□□□□ 0.04
SNPHO15079 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.29■□□□□ 0.04
SNPHO15079 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.28■□□□□ 0.04
SNPHO15079 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNPHO15079 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.28■□□□□ 0.04
SNPHO15079 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.28■□□□□ 0.04
SNPHO15079 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SNPHO15079 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNPHO15079 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
SNPHO15079 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SNPHO15079 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNPHO15079 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
SNPHO15079 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
SNPHO15079 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNPHO15079 NIFK-AS1-202ENST00000414554 1411 ntTSL 2 BASIC15.28■□□□□ 0.04
SNPHO15079 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SNPHO15079 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SNPHO15079 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNPHO15079 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNPHO15079 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SNPHO15079 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.28■□□□□ 0.04
SNPHO15079 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SNPHO15079 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNPHO15079 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNPHO15079 C1QTNF9B-203ENST00000382145 888 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SNPHO15079 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.28■□□□□ 0.04
SNPHO15079 AC002056.1-201ENST00000395613 760 ntBASIC15.28■□□□□ 0.04
SNPHO15079 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC15.28■□□□□ 0.04
SNPHO15079 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.28■□□□□ 0.04
SNPHO15079 ZSWIM7-209ENST00000486655 726 ntTSL 3 BASIC15.28■□□□□ 0.04
SNPHO15079 TRIM36-IT1-201ENST00000503723 881 ntBASIC15.28■□□□□ 0.04
SNPHO15079 YBX1P5-201ENST00000509441 847 ntBASIC15.28■□□□□ 0.04
SNPHO15079 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.28■□□□□ 0.04
SNPHO15079 DHDH-204ENST00000523250 634 ntTSL 5 BASIC15.28■□□□□ 0.04
SNPHO15079 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC15.28■□□□□ 0.04
SNPHO15079 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
SNPHO15079 MTCYBP27-201ENST00000555160 670 ntBASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms