Protein–RNA interactions for Protein: J3KSC0

LINC01387, Putative uncharacterized protein encoded by LINC01387, humanhuman

Predictions only

Length 135 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01387J3KSC0 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
LINC01387J3KSC0 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LINC01387J3KSC0 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.39□□□□□ -0.11
LINC01387J3KSC0 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LINC01387J3KSC0 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC01387J3KSC0 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC01387J3KSC0 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
LINC01387J3KSC0 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
LINC01387J3KSC0 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC01387J3KSC0 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC01387J3KSC0 HIST3H2BA-201ENST00000436555 524 ntBASIC14.39□□□□□ -0.11
LINC01387J3KSC0 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.39□□□□□ -0.11
LINC01387J3KSC0 TSPY16P-201ENST00000449843 468 ntBASIC14.39□□□□□ -0.11
LINC01387J3KSC0 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.39□□□□□ -0.11
LINC01387J3KSC0 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.39□□□□□ -0.11
LINC01387J3KSC0 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.39□□□□□ -0.11
LINC01387J3KSC0 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.39□□□□□ -0.11
LINC01387J3KSC0 AL512361.1-201ENST00000554200 418 ntBASIC14.39□□□□□ -0.11
LINC01387J3KSC0 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.39□□□□□ -0.11
LINC01387J3KSC0 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
LINC01387J3KSC0 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.39□□□□□ -0.11
LINC01387J3KSC0 MIR3197-201ENST00000582241 73 ntBASIC14.39□□□□□ -0.11
LINC01387J3KSC0 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.39□□□□□ -0.11
LINC01387J3KSC0 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC01387J3KSC0 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LINC01387J3KSC0 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.39□□□□□ -0.11
LINC01387J3KSC0 AC074044.1-201ENST00000609673 707 ntBASIC14.39□□□□□ -0.11
LINC01387J3KSC0 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LINC01387J3KSC0 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.39□□□□□ -0.11
LINC01387J3KSC0 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LINC01387J3KSC0 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.39□□□□□ -0.11
LINC01387J3KSC0 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC01387J3KSC0 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC01387J3KSC0 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.39□□□□□ -0.11
LINC01387J3KSC0 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
LINC01387J3KSC0 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC01387J3KSC0 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC01387J3KSC0 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC01387J3KSC0 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.39□□□□□ -0.11
LINC01387J3KSC0 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.39□□□□□ -0.11
LINC01387J3KSC0 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
LINC01387J3KSC0 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
LINC01387J3KSC0 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.39□□□□□ -0.11
LINC01387J3KSC0 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
LINC01387J3KSC0 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC01387J3KSC0 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC01387J3KSC0 PRAL-201ENST00000624952 3286 ntBASIC14.39□□□□□ -0.11
LINC01387J3KSC0 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
LINC01387J3KSC0 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.38□□□□□ -0.11
LINC01387J3KSC0 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC01387J3KSC0 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC01387J3KSC0 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LINC01387J3KSC0 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC01387J3KSC0 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.38□□□□□ -0.11
LINC01387J3KSC0 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC01387J3KSC0 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.38□□□□□ -0.11
LINC01387J3KSC0 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC01387J3KSC0 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
LINC01387J3KSC0 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC01387J3KSC0 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.38□□□□□ -0.11
LINC01387J3KSC0 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC01387J3KSC0 Z97205.2-201ENST00000564697 1639 ntBASIC14.38□□□□□ -0.11
LINC01387J3KSC0 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.38□□□□□ -0.11
LINC01387J3KSC0 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LINC01387J3KSC0 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC01387J3KSC0 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.38□□□□□ -0.11
LINC01387J3KSC0 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC01387J3KSC0 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.38□□□□□ -0.11
LINC01387J3KSC0 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC01387J3KSC0 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC01387J3KSC0 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC01387J3KSC0 AC114501.2-201ENST00000439631 535 ntBASIC14.38□□□□□ -0.11
LINC01387J3KSC0 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.38□□□□□ -0.11
LINC01387J3KSC0 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LINC01387J3KSC0 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LINC01387J3KSC0 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.38□□□□□ -0.11
LINC01387J3KSC0 AC009407.1-201ENST00000568958 598 ntBASIC14.38□□□□□ -0.11
LINC01387J3KSC0 MIR4745-201ENST00000577608 62 ntBASIC14.38□□□□□ -0.11
LINC01387J3KSC0 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.38□□□□□ -0.11
LINC01387J3KSC0 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.38□□□□□ -0.11
LINC01387J3KSC0 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.38□□□□□ -0.11
LINC01387J3KSC0 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC01387J3KSC0 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
LINC01387J3KSC0 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.38□□□□□ -0.11
LINC01387J3KSC0 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC01387J3KSC0 REXO1L1P-202ENST00000608646 1974 ntBASIC14.38□□□□□ -0.11
LINC01387J3KSC0 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC01387J3KSC0 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.38□□□□□ -0.11
LINC01387J3KSC0 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC01387J3KSC0 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC01387J3KSC0 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01387J3KSC0 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC14.37□□□□□ -0.11
LINC01387J3KSC0 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01387J3KSC0 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.37□□□□□ -0.11
LINC01387J3KSC0 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.37□□□□□ -0.11
LINC01387J3KSC0 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
LINC01387J3KSC0 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01387J3KSC0 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.37□□□□□ -0.11
LINC01387J3KSC0 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.37□□□□□ -0.11
LINC01387J3KSC0 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms