Protein–RNA interactions for Protein: C9JVI0

USP17L11, Ubiquitin carboxyl-terminal hydrolase 17-like protein 11, humanhuman

Predictions only

Length 530 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L11C9JVI0 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC18.31■□□□□ 0.52
USP17L11C9JVI0 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
USP17L11C9JVI0 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC18.31■□□□□ 0.52
USP17L11C9JVI0 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC18.31■□□□□ 0.52
USP17L11C9JVI0 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
USP17L11C9JVI0 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
USP17L11C9JVI0 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP17L11C9JVI0 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP17L11C9JVI0 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC18.3■□□□□ 0.52
USP17L11C9JVI0 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP17L11C9JVI0 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP17L11C9JVI0 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP17L11C9JVI0 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
USP17L11C9JVI0 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP17L11C9JVI0 FAM86MP-201ENST00000340703 885 ntBASIC18.3■□□□□ 0.52
USP17L11C9JVI0 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
USP17L11C9JVI0 MIR648-201ENST00000385046 94 ntBASIC18.3■□□□□ 0.52
USP17L11C9JVI0 C1QBPP1-201ENST00000400117 770 ntBASIC18.3■□□□□ 0.52
USP17L11C9JVI0 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP17L11C9JVI0 RPL28-203ENST00000428193 573 ntTSL 2 BASIC18.3■□□□□ 0.52
USP17L11C9JVI0 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
USP17L11C9JVI0 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
USP17L11C9JVI0 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC18.3■□□□□ 0.52
USP17L11C9JVI0 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
USP17L11C9JVI0 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC18.3■□□□□ 0.52
USP17L11C9JVI0 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
USP17L11C9JVI0 AP001889.1-201ENST00000525414 633 ntBASIC18.3■□□□□ 0.52
USP17L11C9JVI0 RPL28-207ENST00000558815 616 ntTSL 2 BASIC18.3■□□□□ 0.52
USP17L11C9JVI0 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC18.3■□□□□ 0.52
USP17L11C9JVI0 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC18.3■□□□□ 0.52
USP17L11C9JVI0 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
USP17L11C9JVI0 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP17L11C9JVI0 AC018892.3-201ENST00000623986 2499 ntBASIC18.3■□□□□ 0.52
USP17L11C9JVI0 BLK-205ENST00000529894 2017 ntTSL 5 BASIC18.3■□□□□ 0.52
USP17L11C9JVI0 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC18.3■□□□□ 0.52
USP17L11C9JVI0 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC18.3■□□□□ 0.52
USP17L11C9JVI0 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
USP17L11C9JVI0 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
USP17L11C9JVI0 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP17L11C9JVI0 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
USP17L11C9JVI0 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
USP17L11C9JVI0 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
USP17L11C9JVI0 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP17L11C9JVI0 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP17L11C9JVI0 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
USP17L11C9JVI0 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP17L11C9JVI0 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
USP17L11C9JVI0 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
USP17L11C9JVI0 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC18.29■□□□□ 0.52
USP17L11C9JVI0 VDAC1P7-201ENST00000462417 847 ntBASIC18.29■□□□□ 0.52
USP17L11C9JVI0 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP17L11C9JVI0 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC18.29■□□□□ 0.52
USP17L11C9JVI0 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC18.29■□□□□ 0.52
USP17L11C9JVI0 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC18.29■□□□□ 0.52
USP17L11C9JVI0 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC18.29■□□□□ 0.52
USP17L11C9JVI0 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC18.29■□□□□ 0.52
USP17L11C9JVI0 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC18.29■□□□□ 0.52
USP17L11C9JVI0 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP17L11C9JVI0 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP17L11C9JVI0 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
USP17L11C9JVI0 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.29■□□□□ 0.52
USP17L11C9JVI0 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC18.29■□□□□ 0.52
USP17L11C9JVI0 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
USP17L11C9JVI0 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP17L11C9JVI0 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
USP17L11C9JVI0 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP17L11C9JVI0 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC18.28■□□□□ 0.52
USP17L11C9JVI0 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP17L11C9JVI0 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC18.28■□□□□ 0.52
USP17L11C9JVI0 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP17L11C9JVI0 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
USP17L11C9JVI0 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP17L11C9JVI0 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC18.28■□□□□ 0.52
USP17L11C9JVI0 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
USP17L11C9JVI0 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC18.28■□□□□ 0.52
USP17L11C9JVI0 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP17L11C9JVI0 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC18.28■□□□□ 0.52
USP17L11C9JVI0 AL583810.1-201ENST00000553344 1045 ntBASIC18.28■□□□□ 0.52
USP17L11C9JVI0 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC18.28■□□□□ 0.52
USP17L11C9JVI0 AC009486.1-201ENST00000569860 813 ntBASIC18.28■□□□□ 0.52
USP17L11C9JVI0 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
USP17L11C9JVI0 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC18.28■□□□□ 0.52
USP17L11C9JVI0 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP17L11C9JVI0 AC097359.3-201ENST00000603982 1210 ntBASIC18.28■□□□□ 0.52
USP17L11C9JVI0 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
USP17L11C9JVI0 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC18.28■□□□□ 0.52
USP17L11C9JVI0 CYP2T1P-202ENST00000641596 2535 ntBASIC18.28■□□□□ 0.52
USP17L11C9JVI0 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP17L11C9JVI0 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP17L11C9JVI0 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC18.28■□□□□ 0.52
USP17L11C9JVI0 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC18.28■□□□□ 0.52
USP17L11C9JVI0 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC18.28■□□□□ 0.52
USP17L11C9JVI0 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP17L11C9JVI0 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
USP17L11C9JVI0 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC18.28■□□□□ 0.52
USP17L11C9JVI0 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.28■□□□□ 0.52
USP17L11C9JVI0 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC18.27■□□□□ 0.52
USP17L11C9JVI0 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
USP17L11C9JVI0 AC124067.4-201ENST00000519691 2379 ntBASIC18.27■□□□□ 0.52
USP17L11C9JVI0 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms