Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 AL513480.1-201ENST00000451731 511 ntBASIC13.61□□□□□ -0.23
TMEM235A6NFC5 HS6ST1P1-201ENST00000481504 1234 ntBASIC13.61□□□□□ -0.23
TMEM235A6NFC5 KRT18P34-201ENST00000488218 1270 ntBASIC13.61□□□□□ -0.23
TMEM235A6NFC5 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC13.61□□□□□ -0.23
TMEM235A6NFC5 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC13.61□□□□□ -0.23
TMEM235A6NFC5 CXCL1P1-201ENST00000502804 216 ntBASIC13.61□□□□□ -0.23
TMEM235A6NFC5 AF238378.1-201ENST00000526806 358 ntBASIC13.61□□□□□ -0.23
TMEM235A6NFC5 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC13.61□□□□□ -0.23
TMEM235A6NFC5 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC13.61□□□□□ -0.23
TMEM235A6NFC5 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC13.61□□□□□ -0.23
TMEM235A6NFC5 AC008735.5-201ENST00000623544 497 ntBASIC13.61□□□□□ -0.23
TMEM235A6NFC5 AL645728.2-201ENST00000641974 660 ntBASIC13.61□□□□□ -0.23
TMEM235A6NFC5 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
TMEM235A6NFC5 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TMEM235A6NFC5 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TMEM235A6NFC5 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TMEM235A6NFC5 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TMEM235A6NFC5 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
TMEM235A6NFC5 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TMEM235A6NFC5 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.61□□□□□ -0.23
TMEM235A6NFC5 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
TMEM235A6NFC5 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.61□□□□□ -0.23
TMEM235A6NFC5 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TMEM235A6NFC5 AL359258.3-201ENST00000622910 2331 ntBASIC13.61□□□□□ -0.23
TMEM235A6NFC5 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TMEM235A6NFC5 AC018892.3-201ENST00000623986 2499 ntBASIC13.61□□□□□ -0.23
TMEM235A6NFC5 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.6□□□□□ -0.23
TMEM235A6NFC5 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM235A6NFC5 AC104581.4-201ENST00000623126 3052 ntBASIC13.6□□□□□ -0.23
TMEM235A6NFC5 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM235A6NFC5 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM235A6NFC5 AL589702.1-201ENST00000641229 1509 ntBASIC13.6□□□□□ -0.23
TMEM235A6NFC5 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM235A6NFC5 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
TMEM235A6NFC5 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM235A6NFC5 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM235A6NFC5 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
TMEM235A6NFC5 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM235A6NFC5 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM235A6NFC5 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM235A6NFC5 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
TMEM235A6NFC5 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC13.6□□□□□ -0.23
TMEM235A6NFC5 TSPY19P-201ENST00000418461 509 ntBASIC13.6□□□□□ -0.23
TMEM235A6NFC5 TSPY18P-201ENST00000441642 509 ntBASIC13.6□□□□□ -0.23
TMEM235A6NFC5 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
TMEM235A6NFC5 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
TMEM235A6NFC5 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC13.6□□□□□ -0.23
TMEM235A6NFC5 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC13.6□□□□□ -0.23
TMEM235A6NFC5 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC13.6□□□□□ -0.23
TMEM235A6NFC5 CFL1-202ENST00000524553 860 ntTSL 2 BASIC13.6□□□□□ -0.23
TMEM235A6NFC5 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM235A6NFC5 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC13.6□□□□□ -0.23
TMEM235A6NFC5 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM235A6NFC5 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC13.6□□□□□ -0.23
TMEM235A6NFC5 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM235A6NFC5 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC13.6□□□□□ -0.23
TMEM235A6NFC5 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
TMEM235A6NFC5 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.6□□□□□ -0.23
TMEM235A6NFC5 AC005593.1-201ENST00000624894 515 ntBASIC13.6□□□□□ -0.23
TMEM235A6NFC5 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
TMEM235A6NFC5 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM235A6NFC5 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.6□□□□□ -0.23
TMEM235A6NFC5 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM235A6NFC5 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM235A6NFC5 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM235A6NFC5 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM235A6NFC5 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
TMEM235A6NFC5 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM235A6NFC5 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM235A6NFC5 AC232323.1-201ENST00000540724 2099 ntBASIC13.6□□□□□ -0.23
TMEM235A6NFC5 REXO1L5P-201ENST00000622260 2098 ntBASIC13.6□□□□□ -0.23
TMEM235A6NFC5 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM235A6NFC5 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
TMEM235A6NFC5 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM235A6NFC5 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.6□□□□□ -0.23
TMEM235A6NFC5 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
TMEM235A6NFC5 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.6□□□□□ -0.23
TMEM235A6NFC5 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
TMEM235A6NFC5 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
TMEM235A6NFC5 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM235A6NFC5 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM235A6NFC5 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM235A6NFC5 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM235A6NFC5 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.59□□□□□ -0.23
TMEM235A6NFC5 LINC00528-201ENST00000600723 2160 ntBASIC13.59□□□□□ -0.23
TMEM235A6NFC5 KRT8P44-201ENST00000441609 1350 ntBASIC13.59□□□□□ -0.23
TMEM235A6NFC5 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM235A6NFC5 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
TMEM235A6NFC5 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
TMEM235A6NFC5 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM235A6NFC5 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM235A6NFC5 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM235A6NFC5 WASH6P-202ENST00000359512 1437 ntBASIC13.59□□□□□ -0.23
TMEM235A6NFC5 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM235A6NFC5 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.59□□□□□ -0.23
TMEM235A6NFC5 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
TMEM235A6NFC5 AC073439.1-201ENST00000624121 1774 ntBASIC13.59□□□□□ -0.23
TMEM235A6NFC5 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM235A6NFC5 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC13.59□□□□□ -0.23
TMEM235A6NFC5 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms