Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TCRBV7S3A2A0A539 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TCRBV7S3A2A0A539 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TCRBV7S3A2A0A539 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.13■□□□□ 0.17
TCRBV7S3A2A0A539 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.13■□□□□ 0.17
TCRBV7S3A2A0A539 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
TCRBV7S3A2A0A539 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.13■□□□□ 0.17
TCRBV7S3A2A0A539 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.13■□□□□ 0.17
TCRBV7S3A2A0A539 BANF1P1-201ENST00000553684 263 ntBASIC16.13■□□□□ 0.17
TCRBV7S3A2A0A539 RARRES2P9-201ENST00000565168 469 ntBASIC16.13■□□□□ 0.17
TCRBV7S3A2A0A539 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.13■□□□□ 0.17
TCRBV7S3A2A0A539 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TCRBV7S3A2A0A539 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.13■□□□□ 0.17
TCRBV7S3A2A0A539 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TCRBV7S3A2A0A539 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TCRBV7S3A2A0A539 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TCRBV7S3A2A0A539 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TCRBV7S3A2A0A539 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TCRBV7S3A2A0A539 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TCRBV7S3A2A0A539 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TCRBV7S3A2A0A539 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.13■□□□□ 0.17
TCRBV7S3A2A0A539 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
TCRBV7S3A2A0A539 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TCRBV7S3A2A0A539 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.13■□□□□ 0.17
TCRBV7S3A2A0A539 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.13■□□□□ 0.17
TCRBV7S3A2A0A539 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.13■□□□□ 0.17
TCRBV7S3A2A0A539 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TCRBV7S3A2A0A539 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TCRBV7S3A2A0A539 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TCRBV7S3A2A0A539 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TCRBV7S3A2A0A539 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TCRBV7S3A2A0A539 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.13■□□□□ 0.17
TCRBV7S3A2A0A539 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TCRBV7S3A2A0A539 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TCRBV7S3A2A0A539 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.12■□□□□ 0.17
TCRBV7S3A2A0A539 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TCRBV7S3A2A0A539 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TCRBV7S3A2A0A539 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TCRBV7S3A2A0A539 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.12■□□□□ 0.17
TCRBV7S3A2A0A539 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TCRBV7S3A2A0A539 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TCRBV7S3A2A0A539 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
TCRBV7S3A2A0A539 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TCRBV7S3A2A0A539 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TCRBV7S3A2A0A539 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.12■□□□□ 0.17
TCRBV7S3A2A0A539 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
TCRBV7S3A2A0A539 FAM58DP-201ENST00000428076 619 ntBASIC16.12■□□□□ 0.17
TCRBV7S3A2A0A539 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.12■□□□□ 0.17
TCRBV7S3A2A0A539 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.12■□□□□ 0.17
TCRBV7S3A2A0A539 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.12■□□□□ 0.17
TCRBV7S3A2A0A539 KRT18P58-201ENST00000527480 1120 ntBASIC16.12■□□□□ 0.17
TCRBV7S3A2A0A539 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.12■□□□□ 0.17
TCRBV7S3A2A0A539 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.12■□□□□ 0.17
TCRBV7S3A2A0A539 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.12■□□□□ 0.17
TCRBV7S3A2A0A539 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.12■□□□□ 0.17
TCRBV7S3A2A0A539 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.12■□□□□ 0.17
TCRBV7S3A2A0A539 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.12■□□□□ 0.17
TCRBV7S3A2A0A539 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.12■□□□□ 0.17
TCRBV7S3A2A0A539 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
TCRBV7S3A2A0A539 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.12■□□□□ 0.17
TCRBV7S3A2A0A539 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TCRBV7S3A2A0A539 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TCRBV7S3A2A0A539 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TCRBV7S3A2A0A539 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TCRBV7S3A2A0A539 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.12■□□□□ 0.17
TCRBV7S3A2A0A539 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TCRBV7S3A2A0A539 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TCRBV7S3A2A0A539 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TCRBV7S3A2A0A539 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TCRBV7S3A2A0A539 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TCRBV7S3A2A0A539 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TCRBV7S3A2A0A539 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TCRBV7S3A2A0A539 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TCRBV7S3A2A0A539 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TCRBV7S3A2A0A539 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TCRBV7S3A2A0A539 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.11■□□□□ 0.17
TCRBV7S3A2A0A539 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TCRBV7S3A2A0A539 AC023024.2-201ENST00000623561 1993 ntBASIC16.11■□□□□ 0.17
TCRBV7S3A2A0A539 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.11■□□□□ 0.17
TCRBV7S3A2A0A539 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TCRBV7S3A2A0A539 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
TCRBV7S3A2A0A539 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TCRBV7S3A2A0A539 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
TCRBV7S3A2A0A539 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
TCRBV7S3A2A0A539 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TCRBV7S3A2A0A539 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TCRBV7S3A2A0A539 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.11■□□□□ 0.17
TCRBV7S3A2A0A539 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TCRBV7S3A2A0A539 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TCRBV7S3A2A0A539 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TCRBV7S3A2A0A539 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TCRBV7S3A2A0A539 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.11■□□□□ 0.17
TCRBV7S3A2A0A539 ACTG1P14-201ENST00000446382 1122 ntBASIC16.11■□□□□ 0.17
TCRBV7S3A2A0A539 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.11■□□□□ 0.17
TCRBV7S3A2A0A539 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.11■□□□□ 0.17
TCRBV7S3A2A0A539 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.11■□□□□ 0.17
TCRBV7S3A2A0A539 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.11■□□□□ 0.17
TCRBV7S3A2A0A539 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.11■□□□□ 0.17
TCRBV7S3A2A0A539 AC022145.2-201ENST00000598203 171 ntBASIC16.11■□□□□ 0.17
TCRBV7S3A2A0A539 AC105339.1-204ENST00000636249 355 ntBASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms