Protein–RNA interactions for Protein: Q9Y5U2

TSSC4, Protein TSSC4, humanhuman

Predicted RBP Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4Q9Y5U2 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TSSC4Q9Y5U2 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TSSC4Q9Y5U2 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TSSC4Q9Y5U2 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC12.5□□□□□ -0.41
TSSC4Q9Y5U2 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC12.5□□□□□ -0.41
TSSC4Q9Y5U2 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC12.5□□□□□ -0.41
TSSC4Q9Y5U2 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC12.5□□□□□ -0.41
TSSC4Q9Y5U2 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC12.5□□□□□ -0.41
TSSC4Q9Y5U2 5S_rRNA.22-201ENST00000614916 106 ntBASIC12.5□□□□□ -0.41
TSSC4Q9Y5U2 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC12.5□□□□□ -0.41
TSSC4Q9Y5U2 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC12.5□□□□□ -0.41
TSSC4Q9Y5U2 CU639417.3-201ENST00000624240 1404 ntBASIC12.5□□□□□ -0.41
TSSC4Q9Y5U2 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
TSSC4Q9Y5U2 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TSSC4Q9Y5U2 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC12.5□□□□□ -0.41
TSSC4Q9Y5U2 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC12.5□□□□□ -0.41
TSSC4Q9Y5U2 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TSSC4Q9Y5U2 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
TSSC4Q9Y5U2 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
TSSC4Q9Y5U2 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
TSSC4Q9Y5U2 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
TSSC4Q9Y5U2 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
TSSC4Q9Y5U2 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC12.5□□□□□ -0.41
TSSC4Q9Y5U2 HLA-A-202ENST00000376806 1854 ntBASIC12.5□□□□□ -0.41
TSSC4Q9Y5U2 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC12.5□□□□□ -0.41
TSSC4Q9Y5U2 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TSSC4Q9Y5U2 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
TSSC4Q9Y5U2 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TSSC4Q9Y5U2 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TSSC4Q9Y5U2 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
TSSC4Q9Y5U2 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC12.5□□□□□ -0.41
TSSC4Q9Y5U2 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TSSC4Q9Y5U2 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TSSC4Q9Y5U2 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
TSSC4Q9Y5U2 AC104581.4-201ENST00000623126 3052 ntBASIC12.5□□□□□ -0.41
TSSC4Q9Y5U2 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TSSC4Q9Y5U2 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
TSSC4Q9Y5U2 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
TSSC4Q9Y5U2 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
TSSC4Q9Y5U2 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
TSSC4Q9Y5U2 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
TSSC4Q9Y5U2 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC12.5□□□□□ -0.41
TSSC4Q9Y5U2 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
TSSC4Q9Y5U2 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TSSC4Q9Y5U2 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
TSSC4Q9Y5U2 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
TSSC4Q9Y5U2 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TSSC4Q9Y5U2 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC12.49□□□□□ -0.41
TSSC4Q9Y5U2 GCK-202ENST00000345378 2421 ntTSL 2 BASIC12.49□□□□□ -0.41
TSSC4Q9Y5U2 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
TSSC4Q9Y5U2 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TSSC4Q9Y5U2 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC12.49□□□□□ -0.41
TSSC4Q9Y5U2 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TSSC4Q9Y5U2 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
TSSC4Q9Y5U2 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TSSC4Q9Y5U2 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
TSSC4Q9Y5U2 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TSSC4Q9Y5U2 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TSSC4Q9Y5U2 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
TSSC4Q9Y5U2 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TSSC4Q9Y5U2 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
TSSC4Q9Y5U2 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TSSC4Q9Y5U2 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TSSC4Q9Y5U2 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
TSSC4Q9Y5U2 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC12.49□□□□□ -0.41
TSSC4Q9Y5U2 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TSSC4Q9Y5U2 FO393414.2-201ENST00000405153 598 ntBASIC12.49□□□□□ -0.41
TSSC4Q9Y5U2 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
TSSC4Q9Y5U2 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC12.49□□□□□ -0.41
TSSC4Q9Y5U2 RASL12-203ENST00000434605 982 ntTSL 2 BASIC12.49□□□□□ -0.41
TSSC4Q9Y5U2 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
TSSC4Q9Y5U2 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC12.49□□□□□ -0.41
TSSC4Q9Y5U2 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC12.49□□□□□ -0.41
TSSC4Q9Y5U2 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC12.49□□□□□ -0.41
TSSC4Q9Y5U2 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC12.49□□□□□ -0.41
TSSC4Q9Y5U2 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC12.49□□□□□ -0.41
TSSC4Q9Y5U2 RAB35-202ENST00000534951 939 ntTSL 2 BASIC12.49□□□□□ -0.41
TSSC4Q9Y5U2 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC12.49□□□□□ -0.41
TSSC4Q9Y5U2 TEX48-202ENST00000612244 662 ntTSL 3 BASIC12.49□□□□□ -0.41
TSSC4Q9Y5U2 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
TSSC4Q9Y5U2 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
TSSC4Q9Y5U2 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
TSSC4Q9Y5U2 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
TSSC4Q9Y5U2 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TSSC4Q9Y5U2 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
TSSC4Q9Y5U2 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TSSC4Q9Y5U2 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TSSC4Q9Y5U2 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC12.49□□□□□ -0.41
TSSC4Q9Y5U2 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
TSSC4Q9Y5U2 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TSSC4Q9Y5U2 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TSSC4Q9Y5U2 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
TSSC4Q9Y5U2 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TSSC4Q9Y5U2 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TSSC4Q9Y5U2 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
TSSC4Q9Y5U2 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
TSSC4Q9Y5U2 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
TSSC4Q9Y5U2 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TSSC4Q9Y5U2 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TSSC4Q9Y5U2 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms