Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHGA11Q9Y5H2 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.45■□□□□ 0.06
PCDHGA11Q9Y5H2 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHGA11Q9Y5H2 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.45■□□□□ 0.06
PCDHGA11Q9Y5H2 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHGA11Q9Y5H2 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHGA11Q9Y5H2 FAM45BP-202ENST00000592932 1624 ntBASIC15.45■□□□□ 0.06
PCDHGA11Q9Y5H2 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.45■□□□□ 0.06
PCDHGA11Q9Y5H2 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
PCDHGA11Q9Y5H2 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHGA11Q9Y5H2 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHGA11Q9Y5H2 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.45■□□□□ 0.06
PCDHGA11Q9Y5H2 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHGA11Q9Y5H2 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHGA11Q9Y5H2 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHGA11Q9Y5H2 BNIP3P1-202ENST00000550043 1585 ntBASIC15.45■□□□□ 0.06
PCDHGA11Q9Y5H2 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGA11Q9Y5H2 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGA11Q9Y5H2 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.44■□□□□ 0.06
PCDHGA11Q9Y5H2 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
PCDHGA11Q9Y5H2 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGA11Q9Y5H2 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGA11Q9Y5H2 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
PCDHGA11Q9Y5H2 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGA11Q9Y5H2 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.44■□□□□ 0.06
PCDHGA11Q9Y5H2 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGA11Q9Y5H2 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.44■□□□□ 0.06
PCDHGA11Q9Y5H2 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
PCDHGA11Q9Y5H2 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGA11Q9Y5H2 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.44■□□□□ 0.06
PCDHGA11Q9Y5H2 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.44■□□□□ 0.06
PCDHGA11Q9Y5H2 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGA11Q9Y5H2 UPF3AP3-201ENST00000420996 769 ntBASIC15.44■□□□□ 0.06
PCDHGA11Q9Y5H2 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.44■□□□□ 0.06
PCDHGA11Q9Y5H2 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.44■□□□□ 0.06
PCDHGA11Q9Y5H2 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.44■□□□□ 0.06
PCDHGA11Q9Y5H2 AP000344.2-201ENST00000512987 629 ntBASIC15.44■□□□□ 0.06
PCDHGA11Q9Y5H2 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.44■□□□□ 0.06
PCDHGA11Q9Y5H2 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.44■□□□□ 0.06
PCDHGA11Q9Y5H2 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.44■□□□□ 0.06
PCDHGA11Q9Y5H2 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.44■□□□□ 0.06
PCDHGA11Q9Y5H2 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGA11Q9Y5H2 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGA11Q9Y5H2 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.44■□□□□ 0.06
PCDHGA11Q9Y5H2 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
PCDHGA11Q9Y5H2 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.44■□□□□ 0.06
PCDHGA11Q9Y5H2 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
PCDHGA11Q9Y5H2 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
PCDHGA11Q9Y5H2 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGA11Q9Y5H2 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGA11Q9Y5H2 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGA11Q9Y5H2 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.44■□□□□ 0.06
PCDHGA11Q9Y5H2 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.44■□□□□ 0.06
PCDHGA11Q9Y5H2 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGA11Q9Y5H2 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGA11Q9Y5H2 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGA11Q9Y5H2 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.44■□□□□ 0.06
PCDHGA11Q9Y5H2 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA11Q9Y5H2 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA11Q9Y5H2 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA11Q9Y5H2 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.43■□□□□ 0.06
PCDHGA11Q9Y5H2 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA11Q9Y5H2 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.43■□□□□ 0.06
PCDHGA11Q9Y5H2 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
PCDHGA11Q9Y5H2 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
PCDHGA11Q9Y5H2 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA11Q9Y5H2 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.43■□□□□ 0.06
PCDHGA11Q9Y5H2 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA11Q9Y5H2 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.43■□□□□ 0.06
PCDHGA11Q9Y5H2 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.43■□□□□ 0.06
PCDHGA11Q9Y5H2 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA11Q9Y5H2 AP002414.2-201ENST00000591780 3365 ntBASIC15.43■□□□□ 0.06
PCDHGA11Q9Y5H2 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA11Q9Y5H2 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA11Q9Y5H2 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA11Q9Y5H2 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA11Q9Y5H2 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA11Q9Y5H2 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
PCDHGA11Q9Y5H2 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.43■□□□□ 0.06
PCDHGA11Q9Y5H2 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA11Q9Y5H2 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA11Q9Y5H2 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA11Q9Y5H2 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
PCDHGA11Q9Y5H2 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.43■□□□□ 0.06
PCDHGA11Q9Y5H2 KRT18P32-201ENST00000424695 1287 ntBASIC15.43■□□□□ 0.06
PCDHGA11Q9Y5H2 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.43■□□□□ 0.06
PCDHGA11Q9Y5H2 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA11Q9Y5H2 AC112482.1-201ENST00000492080 688 ntBASIC15.43■□□□□ 0.06
PCDHGA11Q9Y5H2 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.43■□□□□ 0.06
PCDHGA11Q9Y5H2 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.43■□□□□ 0.06
PCDHGA11Q9Y5H2 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
PCDHGA11Q9Y5H2 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.43■□□□□ 0.06
PCDHGA11Q9Y5H2 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.43■□□□□ 0.06
PCDHGA11Q9Y5H2 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA11Q9Y5H2 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA11Q9Y5H2 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA11Q9Y5H2 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.43■□□□□ 0.06
PCDHGA11Q9Y5H2 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGA11Q9Y5H2 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.43■□□□□ 0.06
PCDHGA11Q9Y5H2 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms