Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
PCDHB13Q9Y5F0 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHB13Q9Y5F0 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC17.65■□□□□ 0.42
PCDHB13Q9Y5F0 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC17.65■□□□□ 0.42
PCDHB13Q9Y5F0 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHB13Q9Y5F0 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.65■□□□□ 0.42
PCDHB13Q9Y5F0 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC17.65■□□□□ 0.42
PCDHB13Q9Y5F0 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHB13Q9Y5F0 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHB13Q9Y5F0 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHB13Q9Y5F0 CASC19-229ENST00000641418 1373 ntBASIC17.65■□□□□ 0.42
PCDHB13Q9Y5F0 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
PCDHB13Q9Y5F0 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.64■□□□□ 0.42
PCDHB13Q9Y5F0 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHB13Q9Y5F0 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.64■□□□□ 0.41
PCDHB13Q9Y5F0 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHB13Q9Y5F0 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHB13Q9Y5F0 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHB13Q9Y5F0 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHB13Q9Y5F0 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHB13Q9Y5F0 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHB13Q9Y5F0 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHB13Q9Y5F0 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.64■□□□□ 0.41
PCDHB13Q9Y5F0 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.64■□□□□ 0.41
PCDHB13Q9Y5F0 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
PCDHB13Q9Y5F0 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC17.64■□□□□ 0.41
PCDHB13Q9Y5F0 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHB13Q9Y5F0 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHB13Q9Y5F0 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
PCDHB13Q9Y5F0 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHB13Q9Y5F0 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHB13Q9Y5F0 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
PCDHB13Q9Y5F0 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHB13Q9Y5F0 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHB13Q9Y5F0 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHB13Q9Y5F0 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
PCDHB13Q9Y5F0 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHB13Q9Y5F0 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
PCDHB13Q9Y5F0 AC073310.1-201ENST00000423226 1033 ntBASIC17.64■□□□□ 0.41
PCDHB13Q9Y5F0 VN1R53P-201ENST00000429536 957 ntBASIC17.64■□□□□ 0.41
PCDHB13Q9Y5F0 METTL21AP1-201ENST00000438852 635 ntBASIC17.64■□□□□ 0.41
PCDHB13Q9Y5F0 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHB13Q9Y5F0 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.64■□□□□ 0.41
PCDHB13Q9Y5F0 AC067863.1-201ENST00000494933 530 ntBASIC17.64■□□□□ 0.41
PCDHB13Q9Y5F0 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHB13Q9Y5F0 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.64■□□□□ 0.41
PCDHB13Q9Y5F0 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.64■□□□□ 0.41
PCDHB13Q9Y5F0 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.64■□□□□ 0.41
PCDHB13Q9Y5F0 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.64■□□□□ 0.41
PCDHB13Q9Y5F0 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
PCDHB13Q9Y5F0 FGA-203ENST00000622532 1130 ntTSL 5 BASIC17.64■□□□□ 0.41
PCDHB13Q9Y5F0 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.64■□□□□ 0.41
PCDHB13Q9Y5F0 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.64■□□□□ 0.41
PCDHB13Q9Y5F0 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHB13Q9Y5F0 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.64■□□□□ 0.41
PCDHB13Q9Y5F0 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHB13Q9Y5F0 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHB13Q9Y5F0 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHB13Q9Y5F0 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHB13Q9Y5F0 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.64■□□□□ 0.41
PCDHB13Q9Y5F0 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
PCDHB13Q9Y5F0 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHB13Q9Y5F0 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
PCDHB13Q9Y5F0 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
PCDHB13Q9Y5F0 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHB13Q9Y5F0 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.63■□□□□ 0.41
PCDHB13Q9Y5F0 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHB13Q9Y5F0 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHB13Q9Y5F0 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDHB13Q9Y5F0 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHB13Q9Y5F0 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.63■□□□□ 0.41
PCDHB13Q9Y5F0 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.63■□□□□ 0.41
PCDHB13Q9Y5F0 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.63■□□□□ 0.41
PCDHB13Q9Y5F0 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHB13Q9Y5F0 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDHB13Q9Y5F0 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHB13Q9Y5F0 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.63■□□□□ 0.41
PCDHB13Q9Y5F0 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
PCDHB13Q9Y5F0 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
PCDHB13Q9Y5F0 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.63■□□□□ 0.41
PCDHB13Q9Y5F0 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.63■□□□□ 0.41
PCDHB13Q9Y5F0 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.63■□□□□ 0.41
PCDHB13Q9Y5F0 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHB13Q9Y5F0 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHB13Q9Y5F0 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.63■□□□□ 0.41
PCDHB13Q9Y5F0 FXR1-221ENST00000491674 365 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDHB13Q9Y5F0 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.63■□□□□ 0.41
PCDHB13Q9Y5F0 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHB13Q9Y5F0 AC107884.1-203ENST00000530846 628 ntTSL 3 BASIC17.63■□□□□ 0.41
PCDHB13Q9Y5F0 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHB13Q9Y5F0 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.63■□□□□ 0.41
PCDHB13Q9Y5F0 AL589739.1-201ENST00000607720 493 ntBASIC17.63■□□□□ 0.41
PCDHB13Q9Y5F0 GPER1-207ENST00000619052 571 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDHB13Q9Y5F0 AC093028.1-201ENST00000622998 982 ntBASIC17.63■□□□□ 0.41
PCDHB13Q9Y5F0 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHB13Q9Y5F0 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
PCDHB13Q9Y5F0 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHB13Q9Y5F0 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.63■□□□□ 0.41
PCDHB13Q9Y5F0 SEPT7P7-201ENST00000420492 1301 ntBASIC17.63■□□□□ 0.41
PCDHB13Q9Y5F0 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms