Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
YIPF1Q9Y548 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
YIPF1Q9Y548 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
YIPF1Q9Y548 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.46■□□□□ 0.22
YIPF1Q9Y548 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.45■□□□□ 0.22
YIPF1Q9Y548 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
YIPF1Q9Y548 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
YIPF1Q9Y548 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC16.45■□□□□ 0.22
YIPF1Q9Y548 DRD5P1-201ENST00000456605 1438 ntBASIC16.45■□□□□ 0.22
YIPF1Q9Y548 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
YIPF1Q9Y548 AC018695.7-201ENST00000624587 2492 ntBASIC16.45■□□□□ 0.22
YIPF1Q9Y548 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
YIPF1Q9Y548 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
YIPF1Q9Y548 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
YIPF1Q9Y548 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
YIPF1Q9Y548 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
YIPF1Q9Y548 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
YIPF1Q9Y548 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
YIPF1Q9Y548 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
YIPF1Q9Y548 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
YIPF1Q9Y548 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
YIPF1Q9Y548 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
YIPF1Q9Y548 KLF2P4-201ENST00000451959 1225 ntBASIC16.45■□□□□ 0.22
YIPF1Q9Y548 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.45■□□□□ 0.22
YIPF1Q9Y548 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC16.45■□□□□ 0.22
YIPF1Q9Y548 MFF-223ENST00000524634 647 ntTSL 2 BASIC16.45■□□□□ 0.22
YIPF1Q9Y548 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC16.45■□□□□ 0.22
YIPF1Q9Y548 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
YIPF1Q9Y548 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC16.45■□□□□ 0.22
YIPF1Q9Y548 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC16.45■□□□□ 0.22
YIPF1Q9Y548 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
YIPF1Q9Y548 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC16.45■□□□□ 0.22
YIPF1Q9Y548 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.45■□□□□ 0.22
YIPF1Q9Y548 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
YIPF1Q9Y548 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
YIPF1Q9Y548 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
YIPF1Q9Y548 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.45■□□□□ 0.22
YIPF1Q9Y548 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC16.45■□□□□ 0.22
YIPF1Q9Y548 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.45■□□□□ 0.22
YIPF1Q9Y548 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
YIPF1Q9Y548 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
YIPF1Q9Y548 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.45■□□□□ 0.22
YIPF1Q9Y548 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
YIPF1Q9Y548 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.45■□□□□ 0.22
YIPF1Q9Y548 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC16.45■□□□□ 0.22
YIPF1Q9Y548 TP73-213ENST00000604479 1623 ntTSL 5 BASIC16.45■□□□□ 0.22
YIPF1Q9Y548 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.45■□□□□ 0.22
YIPF1Q9Y548 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.44■□□□□ 0.22
YIPF1Q9Y548 LTB4R2-202ENST00000528054 3092 ntBASIC16.44■□□□□ 0.22
YIPF1Q9Y548 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
YIPF1Q9Y548 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.44■□□□□ 0.22
YIPF1Q9Y548 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
YIPF1Q9Y548 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
YIPF1Q9Y548 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
YIPF1Q9Y548 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
YIPF1Q9Y548 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
YIPF1Q9Y548 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
YIPF1Q9Y548 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
YIPF1Q9Y548 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.44■□□□□ 0.22
YIPF1Q9Y548 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
YIPF1Q9Y548 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
YIPF1Q9Y548 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
YIPF1Q9Y548 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC16.44■□□□□ 0.22
YIPF1Q9Y548 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
YIPF1Q9Y548 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
YIPF1Q9Y548 BAATP1-201ENST00000412284 1225 ntBASIC16.44■□□□□ 0.22
YIPF1Q9Y548 USB1-202ENST00000423271 1217 ntTSL 2 BASIC16.44■□□□□ 0.22
YIPF1Q9Y548 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC16.44■□□□□ 0.22
YIPF1Q9Y548 AC012441.1-201ENST00000446669 685 ntBASIC16.44■□□□□ 0.22
YIPF1Q9Y548 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC16.44■□□□□ 0.22
YIPF1Q9Y548 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
YIPF1Q9Y548 AC093433.1-201ENST00000458048 571 ntBASIC16.44■□□□□ 0.22
YIPF1Q9Y548 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC16.44■□□□□ 0.22
YIPF1Q9Y548 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
YIPF1Q9Y548 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.44■□□□□ 0.22
YIPF1Q9Y548 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.44■□□□□ 0.22
YIPF1Q9Y548 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC16.44■□□□□ 0.22
YIPF1Q9Y548 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
YIPF1Q9Y548 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
YIPF1Q9Y548 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.44■□□□□ 0.22
YIPF1Q9Y548 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.44■□□□□ 0.22
YIPF1Q9Y548 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
YIPF1Q9Y548 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
YIPF1Q9Y548 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
YIPF1Q9Y548 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.44■□□□□ 0.22
YIPF1Q9Y548 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
YIPF1Q9Y548 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
YIPF1Q9Y548 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
YIPF1Q9Y548 AC134312.5-201ENST00000568031 1313 ntBASIC16.44■□□□□ 0.22
YIPF1Q9Y548 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
YIPF1Q9Y548 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
YIPF1Q9Y548 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
YIPF1Q9Y548 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
YIPF1Q9Y548 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
YIPF1Q9Y548 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
YIPF1Q9Y548 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.43■□□□□ 0.22
YIPF1Q9Y548 PCDH8P1-201ENST00000428983 2773 ntBASIC16.43■□□□□ 0.22
YIPF1Q9Y548 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
YIPF1Q9Y548 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.43■□□□□ 0.22
YIPF1Q9Y548 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms