Protein–RNA interactions for Protein: Q9Y282

ERGIC3, Endoplasmic reticulum-Golgi intermediate compartment protein 3, humanhuman

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3Q9Y282 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
ERGIC3Q9Y282 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
ERGIC3Q9Y282 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.57□□□□□ -0.08
ERGIC3Q9Y282 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ERGIC3Q9Y282 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ERGIC3Q9Y282 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ERGIC3Q9Y282 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.57□□□□□ -0.08
ERGIC3Q9Y282 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
ERGIC3Q9Y282 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ERGIC3Q9Y282 MROH4P-201ENST00000431302 1578 ntBASIC14.57□□□□□ -0.08
ERGIC3Q9Y282 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
ERGIC3Q9Y282 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.57□□□□□ -0.08
ERGIC3Q9Y282 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.57□□□□□ -0.08
ERGIC3Q9Y282 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ERGIC3Q9Y282 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
ERGIC3Q9Y282 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
ERGIC3Q9Y282 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
ERGIC3Q9Y282 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ERGIC3Q9Y282 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ERGIC3Q9Y282 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ERGIC3Q9Y282 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC14.57□□□□□ -0.08
ERGIC3Q9Y282 TMPOP1-202ENST00000424642 1267 ntBASIC14.57□□□□□ -0.08
ERGIC3Q9Y282 IGHV3-47-201ENST00000425060 335 ntBASIC14.57□□□□□ -0.08
ERGIC3Q9Y282 DRAXINP1-201ENST00000437611 948 ntBASIC14.57□□□□□ -0.08
ERGIC3Q9Y282 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC14.57□□□□□ -0.08
ERGIC3Q9Y282 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ERGIC3Q9Y282 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ERGIC3Q9Y282 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC14.57□□□□□ -0.08
ERGIC3Q9Y282 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ERGIC3Q9Y282 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.57□□□□□ -0.08
ERGIC3Q9Y282 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.57□□□□□ -0.08
ERGIC3Q9Y282 AC005412.3-201ENST00000580309 715 ntBASIC14.57□□□□□ -0.08
ERGIC3Q9Y282 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ERGIC3Q9Y282 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC14.57□□□□□ -0.08
ERGIC3Q9Y282 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.57□□□□□ -0.08
ERGIC3Q9Y282 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ERGIC3Q9Y282 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ERGIC3Q9Y282 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
ERGIC3Q9Y282 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
ERGIC3Q9Y282 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ERGIC3Q9Y282 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ERGIC3Q9Y282 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
ERGIC3Q9Y282 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.57□□□□□ -0.08
ERGIC3Q9Y282 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.57□□□□□ -0.08
ERGIC3Q9Y282 AC016734.2-201ENST00000624325 1377 ntBASIC14.57□□□□□ -0.08
ERGIC3Q9Y282 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.57□□□□□ -0.08
ERGIC3Q9Y282 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
ERGIC3Q9Y282 ST20-AS1-201ENST00000560255 4223 ntBASIC14.57□□□□□ -0.08
ERGIC3Q9Y282 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.57□□□□□ -0.08
ERGIC3Q9Y282 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
ERGIC3Q9Y282 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ERGIC3Q9Y282 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ERGIC3Q9Y282 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
ERGIC3Q9Y282 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ERGIC3Q9Y282 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
ERGIC3Q9Y282 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
ERGIC3Q9Y282 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
ERGIC3Q9Y282 AC090616.6-203ENST00000579186 1945 ntBASIC14.56□□□□□ -0.08
ERGIC3Q9Y282 AC011477.6-201ENST00000604980 1927 ntBASIC14.56□□□□□ -0.08
ERGIC3Q9Y282 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.56□□□□□ -0.08
ERGIC3Q9Y282 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ERGIC3Q9Y282 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ERGIC3Q9Y282 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
ERGIC3Q9Y282 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ERGIC3Q9Y282 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
ERGIC3Q9Y282 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.56□□□□□ -0.08
ERGIC3Q9Y282 FGD5P1-202ENST00000614866 2498 ntBASIC14.56□□□□□ -0.08
ERGIC3Q9Y282 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ERGIC3Q9Y282 AC105250.1-201ENST00000509378 2057 ntBASIC14.56□□□□□ -0.08
ERGIC3Q9Y282 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ERGIC3Q9Y282 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ERGIC3Q9Y282 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ERGIC3Q9Y282 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ERGIC3Q9Y282 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC14.56□□□□□ -0.08
ERGIC3Q9Y282 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
ERGIC3Q9Y282 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
ERGIC3Q9Y282 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
ERGIC3Q9Y282 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
ERGIC3Q9Y282 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
ERGIC3Q9Y282 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC14.56□□□□□ -0.08
ERGIC3Q9Y282 PPIH-202ENST00000372549 327 ntTSL 3 BASIC14.56□□□□□ -0.08
ERGIC3Q9Y282 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
ERGIC3Q9Y282 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ERGIC3Q9Y282 AC022616.7-201ENST00000525383 220 ntBASIC14.56□□□□□ -0.08
ERGIC3Q9Y282 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC14.56□□□□□ -0.08
ERGIC3Q9Y282 AL160237.2-201ENST00000556165 472 ntBASIC14.56□□□□□ -0.08
ERGIC3Q9Y282 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
ERGIC3Q9Y282 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC14.56□□□□□ -0.08
ERGIC3Q9Y282 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.56□□□□□ -0.08
ERGIC3Q9Y282 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
ERGIC3Q9Y282 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
ERGIC3Q9Y282 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ERGIC3Q9Y282 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ERGIC3Q9Y282 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ERGIC3Q9Y282 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ERGIC3Q9Y282 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
ERGIC3Q9Y282 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ERGIC3Q9Y282 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
ERGIC3Q9Y282 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ERGIC3Q9Y282 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms