Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC19.02■□□□□ 0.63
ZC3H4Q9UPT8 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC19.01■□□□□ 0.63
ZC3H4Q9UPT8 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
ZC3H4Q9UPT8 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZC3H4Q9UPT8 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZC3H4Q9UPT8 NDUFAB1P1-201ENST00000404262 460 ntBASIC19.01■□□□□ 0.63
ZC3H4Q9UPT8 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ZC3H4Q9UPT8 NKAIN1P1-201ENST00000435754 582 ntBASIC19.01■□□□□ 0.63
ZC3H4Q9UPT8 RN7SL818P-201ENST00000485099 259 ntBASIC19.01■□□□□ 0.63
ZC3H4Q9UPT8 AC044849.1-201ENST00000519737 1188 ntBASIC19.01■□□□□ 0.63
ZC3H4Q9UPT8 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC19.01■□□□□ 0.63
ZC3H4Q9UPT8 RN7SL725P-201ENST00000606439 259 ntBASIC19.01■□□□□ 0.63
ZC3H4Q9UPT8 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZC3H4Q9UPT8 AC244157.2-201ENST00000616239 1006 ntBASIC19.01■□□□□ 0.63
ZC3H4Q9UPT8 ETV2-208ENST00000621247 941 ntTSL 5 BASIC19.01■□□□□ 0.63
ZC3H4Q9UPT8 AC100757.4-201ENST00000626934 759 ntBASIC19.01■□□□□ 0.63
ZC3H4Q9UPT8 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC19.01■□□□□ 0.63
ZC3H4Q9UPT8 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZC3H4Q9UPT8 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ZC3H4Q9UPT8 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC19.01■□□□□ 0.63
ZC3H4Q9UPT8 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZC3H4Q9UPT8 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZC3H4Q9UPT8 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
ZC3H4Q9UPT8 AC092053.1-201ENST00000605787 1936 ntBASIC19.01■□□□□ 0.63
ZC3H4Q9UPT8 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZC3H4Q9UPT8 AL023775.1-201ENST00000454907 1746 ntBASIC19.01■□□□□ 0.63
ZC3H4Q9UPT8 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZC3H4Q9UPT8 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ZC3H4Q9UPT8 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ZC3H4Q9UPT8 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZC3H4Q9UPT8 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC19.01■□□□□ 0.63
ZC3H4Q9UPT8 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC19.01■□□□□ 0.63
ZC3H4Q9UPT8 TUBBP5-203ENST00000508529 1334 ntBASIC19.01■□□□□ 0.63
ZC3H4Q9UPT8 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZC3H4Q9UPT8 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC19.01■□□□□ 0.63
ZC3H4Q9UPT8 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZC3H4Q9UPT8 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC19.01■□□□□ 0.63
ZC3H4Q9UPT8 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC19.01■□□□□ 0.63
ZC3H4Q9UPT8 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZC3H4Q9UPT8 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ZC3H4Q9UPT8 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC19.01■□□□□ 0.63
ZC3H4Q9UPT8 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZC3H4Q9UPT8 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZC3H4Q9UPT8 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ZC3H4Q9UPT8 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
ZC3H4Q9UPT8 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ZC3H4Q9UPT8 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ZC3H4Q9UPT8 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
ZC3H4Q9UPT8 MSRA-203ENST00000441698 788 ntTSL 2 BASIC19■□□□□ 0.63
ZC3H4Q9UPT8 Z97180.1-201ENST00000445173 988 ntBASIC19■□□□□ 0.63
ZC3H4Q9UPT8 RN7SL11P-201ENST00000471305 293 ntBASIC19■□□□□ 0.63
ZC3H4Q9UPT8 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC19■□□□□ 0.63
ZC3H4Q9UPT8 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
ZC3H4Q9UPT8 RN7SL574P-201ENST00000581512 297 ntBASIC19■□□□□ 0.63
ZC3H4Q9UPT8 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC19■□□□□ 0.63
ZC3H4Q9UPT8 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19■□□□□ 0.63
ZC3H4Q9UPT8 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ZC3H4Q9UPT8 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
ZC3H4Q9UPT8 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
ZC3H4Q9UPT8 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
ZC3H4Q9UPT8 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC19■□□□□ 0.63
ZC3H4Q9UPT8 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ZC3H4Q9UPT8 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
ZC3H4Q9UPT8 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ZC3H4Q9UPT8 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ZC3H4Q9UPT8 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC19■□□□□ 0.63
ZC3H4Q9UPT8 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC19■□□□□ 0.63
ZC3H4Q9UPT8 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC19■□□□□ 0.63
ZC3H4Q9UPT8 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
ZC3H4Q9UPT8 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
ZC3H4Q9UPT8 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC19■□□□□ 0.63
ZC3H4Q9UPT8 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC19■□□□□ 0.63
ZC3H4Q9UPT8 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
ZC3H4Q9UPT8 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC19■□□□□ 0.63
ZC3H4Q9UPT8 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC19■□□□□ 0.63
ZC3H4Q9UPT8 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC19■□□□□ 0.63
ZC3H4Q9UPT8 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC19■□□□□ 0.63
ZC3H4Q9UPT8 MPV17-205ENST00000402310 906 ntTSL 5 BASIC19■□□□□ 0.63
ZC3H4Q9UPT8 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC19■□□□□ 0.63
ZC3H4Q9UPT8 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC19■□□□□ 0.63
ZC3H4Q9UPT8 AC024681.1-201ENST00000521917 487 ntBASIC19■□□□□ 0.63
ZC3H4Q9UPT8 RN7SL555P-201ENST00000584742 339 ntBASIC19■□□□□ 0.63
ZC3H4Q9UPT8 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC19■□□□□ 0.63
ZC3H4Q9UPT8 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZC3H4Q9UPT8 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
ZC3H4Q9UPT8 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZC3H4Q9UPT8 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZC3H4Q9UPT8 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZC3H4Q9UPT8 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZC3H4Q9UPT8 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ZC3H4Q9UPT8 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZC3H4Q9UPT8 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZC3H4Q9UPT8 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZC3H4Q9UPT8 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZC3H4Q9UPT8 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZC3H4Q9UPT8 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZC3H4Q9UPT8 AL354989.2-201ENST00000435838 1540 ntBASIC18.99■□□□□ 0.63
ZC3H4Q9UPT8 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC18.99■□□□□ 0.63
ZC3H4Q9UPT8 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
ZC3H4Q9UPT8 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms