Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGB4Q9UN71 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGB4Q9UN71 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.48■□□□□ 0.07
PCDHGB4Q9UN71 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGB4Q9UN71 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGB4Q9UN71 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGB4Q9UN71 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGB4Q9UN71 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.48■□□□□ 0.07
PCDHGB4Q9UN71 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGB4Q9UN71 KRT18P34-201ENST00000488218 1270 ntBASIC15.48■□□□□ 0.07
PCDHGB4Q9UN71 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.48■□□□□ 0.07
PCDHGB4Q9UN71 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
PCDHGB4Q9UN71 UNC93B6-202ENST00000528242 690 ntBASIC15.48■□□□□ 0.07
PCDHGB4Q9UN71 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.48■□□□□ 0.07
PCDHGB4Q9UN71 AP001005.1-201ENST00000571755 1248 ntBASIC15.48■□□□□ 0.07
PCDHGB4Q9UN71 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
PCDHGB4Q9UN71 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
PCDHGB4Q9UN71 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.48■□□□□ 0.07
PCDHGB4Q9UN71 AL031008.1-201ENST00000619963 541 ntBASIC15.48■□□□□ 0.07
PCDHGB4Q9UN71 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.48■□□□□ 0.07
PCDHGB4Q9UN71 AC116407.3-201ENST00000623905 1129 ntBASIC15.48■□□□□ 0.07
PCDHGB4Q9UN71 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGB4Q9UN71 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.48■□□□□ 0.07
PCDHGB4Q9UN71 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGB4Q9UN71 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC15.48■□□□□ 0.07
PCDHGB4Q9UN71 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGB4Q9UN71 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGB4Q9UN71 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
PCDHGB4Q9UN71 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGB4Q9UN71 OR2I1P-210ENST00000642037 4691 ntBASIC15.48■□□□□ 0.07
PCDHGB4Q9UN71 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
PCDHGB4Q9UN71 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
PCDHGB4Q9UN71 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
PCDHGB4Q9UN71 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.48■□□□□ 0.07
PCDHGB4Q9UN71 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGB4Q9UN71 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.47■□□□□ 0.07
PCDHGB4Q9UN71 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGB4Q9UN71 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGB4Q9UN71 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGB4Q9UN71 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGB4Q9UN71 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
PCDHGB4Q9UN71 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
PCDHGB4Q9UN71 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.47■□□□□ 0.07
PCDHGB4Q9UN71 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGB4Q9UN71 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.47■□□□□ 0.07
PCDHGB4Q9UN71 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGB4Q9UN71 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGB4Q9UN71 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGB4Q9UN71 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
PCDHGB4Q9UN71 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGB4Q9UN71 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGB4Q9UN71 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
PCDHGB4Q9UN71 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGB4Q9UN71 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGB4Q9UN71 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGB4Q9UN71 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.47■□□□□ 0.07
PCDHGB4Q9UN71 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGB4Q9UN71 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGB4Q9UN71 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.47■□□□□ 0.07
PCDHGB4Q9UN71 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.47■□□□□ 0.07
PCDHGB4Q9UN71 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGB4Q9UN71 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.47■□□□□ 0.07
PCDHGB4Q9UN71 TPM4P1-201ENST00000436100 807 ntBASIC15.47■□□□□ 0.07
PCDHGB4Q9UN71 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGB4Q9UN71 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.47■□□□□ 0.07
PCDHGB4Q9UN71 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.47■□□□□ 0.07
PCDHGB4Q9UN71 AP002469.2-201ENST00000531724 424 ntBASIC15.47■□□□□ 0.07
PCDHGB4Q9UN71 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.47■□□□□ 0.07
PCDHGB4Q9UN71 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC15.47■□□□□ 0.07
PCDHGB4Q9UN71 AC096734.2-201ENST00000562054 433 ntBASIC15.47■□□□□ 0.07
PCDHGB4Q9UN71 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGB4Q9UN71 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.47■□□□□ 0.07
PCDHGB4Q9UN71 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.47■□□□□ 0.07
PCDHGB4Q9UN71 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGB4Q9UN71 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.47■□□□□ 0.07
PCDHGB4Q9UN71 CICP23-201ENST00000605013 2741 ntBASIC15.47■□□□□ 0.07
PCDHGB4Q9UN71 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGB4Q9UN71 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGB4Q9UN71 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGB4Q9UN71 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGB4Q9UN71 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.47■□□□□ 0.07
PCDHGB4Q9UN71 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.47■□□□□ 0.07
PCDHGB4Q9UN71 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGB4Q9UN71 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.47■□□□□ 0.07
PCDHGB4Q9UN71 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGB4Q9UN71 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGB4Q9UN71 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
PCDHGB4Q9UN71 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.46■□□□□ 0.07
PCDHGB4Q9UN71 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.46■□□□□ 0.07
PCDHGB4Q9UN71 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGB4Q9UN71 AC069224.1-201ENST00000566372 1715 ntBASIC15.46■□□□□ 0.07
PCDHGB4Q9UN71 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGB4Q9UN71 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
PCDHGB4Q9UN71 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGB4Q9UN71 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGB4Q9UN71 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGB4Q9UN71 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGB4Q9UN71 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC15.46■□□□□ 0.07
PCDHGB4Q9UN71 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.46■□□□□ 0.07
PCDHGB4Q9UN71 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms