Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SCN11AQ9UI33 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
SCN11AQ9UI33 NUS1P3-201ENST00000423502 862 ntBASIC19.96■□□□□ 0.79
SCN11AQ9UI33 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC19.96■□□□□ 0.79
SCN11AQ9UI33 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC19.96■□□□□ 0.79
SCN11AQ9UI33 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC19.96■□□□□ 0.79
SCN11AQ9UI33 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC19.96■□□□□ 0.79
SCN11AQ9UI33 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SCN11AQ9UI33 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC19.96■□□□□ 0.79
SCN11AQ9UI33 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SCN11AQ9UI33 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC19.96■□□□□ 0.79
SCN11AQ9UI33 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC19.96■□□□□ 0.79
SCN11AQ9UI33 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC19.96■□□□□ 0.79
SCN11AQ9UI33 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SCN11AQ9UI33 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC19.96■□□□□ 0.79
SCN11AQ9UI33 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SCN11AQ9UI33 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
SCN11AQ9UI33 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC19.96■□□□□ 0.79
SCN11AQ9UI33 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
SCN11AQ9UI33 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SCN11AQ9UI33 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC19.95■□□□□ 0.78
SCN11AQ9UI33 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
SCN11AQ9UI33 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC19.95■□□□□ 0.78
SCN11AQ9UI33 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC19.95■□□□□ 0.78
SCN11AQ9UI33 AC114812.1-204ENST00000449669 728 ntBASIC19.95■□□□□ 0.78
SCN11AQ9UI33 DUX4L47-201ENST00000566374 394 ntBASIC19.95■□□□□ 0.78
SCN11AQ9UI33 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC19.95■□□□□ 0.78
SCN11AQ9UI33 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC19.95■□□□□ 0.78
SCN11AQ9UI33 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC19.95■□□□□ 0.78
SCN11AQ9UI33 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SCN11AQ9UI33 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
SCN11AQ9UI33 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SCN11AQ9UI33 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SCN11AQ9UI33 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC19.95■□□□□ 0.78
SCN11AQ9UI33 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SCN11AQ9UI33 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SCN11AQ9UI33 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SCN11AQ9UI33 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC19.95■□□□□ 0.78
SCN11AQ9UI33 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SCN11AQ9UI33 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
SCN11AQ9UI33 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SCN11AQ9UI33 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC19.95■□□□□ 0.78
SCN11AQ9UI33 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC19.95■□□□□ 0.78
SCN11AQ9UI33 AHCYP2-201ENST00000430630 1300 ntBASIC19.95■□□□□ 0.78
SCN11AQ9UI33 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SCN11AQ9UI33 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SCN11AQ9UI33 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SCN11AQ9UI33 MPV17-205ENST00000402310 906 ntTSL 5 BASIC19.95■□□□□ 0.78
SCN11AQ9UI33 AL354877.1-201ENST00000424412 413 ntBASIC19.95■□□□□ 0.78
SCN11AQ9UI33 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC19.95■□□□□ 0.78
SCN11AQ9UI33 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC19.95■□□□□ 0.78
SCN11AQ9UI33 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SCN11AQ9UI33 IGHJ2P-201ENST00000454480 60 ntBASIC19.95■□□□□ 0.78
SCN11AQ9UI33 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC19.95■□□□□ 0.78
SCN11AQ9UI33 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC19.95■□□□□ 0.78
SCN11AQ9UI33 ACTG1P17-201ENST00000558391 1119 ntBASIC19.95■□□□□ 0.78
SCN11AQ9UI33 AC005730.2-201ENST00000564549 1184 ntBASIC19.95■□□□□ 0.78
SCN11AQ9UI33 AC103810.3-201ENST00000583567 96 ntBASIC19.95■□□□□ 0.78
SCN11AQ9UI33 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SCN11AQ9UI33 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SCN11AQ9UI33 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
SCN11AQ9UI33 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
SCN11AQ9UI33 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC19.94■□□□□ 0.78
SCN11AQ9UI33 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SCN11AQ9UI33 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.94■□□□□ 0.78
SCN11AQ9UI33 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC19.94■□□□□ 0.78
SCN11AQ9UI33 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SCN11AQ9UI33 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SCN11AQ9UI33 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC19.94■□□□□ 0.78
SCN11AQ9UI33 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC19.94■□□□□ 0.78
SCN11AQ9UI33 RGS5-214ENST00000429865 754 ntTSL 3 BASIC19.94■□□□□ 0.78
SCN11AQ9UI33 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC19.94■□□□□ 0.78
SCN11AQ9UI33 KRT8P13-201ENST00000463294 1010 ntBASIC19.94■□□□□ 0.78
SCN11AQ9UI33 TPI1-206ENST00000488464 791 ntTSL 5 BASIC19.94■□□□□ 0.78
SCN11AQ9UI33 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC19.94■□□□□ 0.78
SCN11AQ9UI33 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC19.94■□□□□ 0.78
SCN11AQ9UI33 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
SCN11AQ9UI33 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC19.94■□□□□ 0.78
SCN11AQ9UI33 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC19.94■□□□□ 0.78
SCN11AQ9UI33 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SCN11AQ9UI33 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SCN11AQ9UI33 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
SCN11AQ9UI33 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SCN11AQ9UI33 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SCN11AQ9UI33 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SCN11AQ9UI33 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC19.94■□□□□ 0.78
SCN11AQ9UI33 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC19.93■□□□□ 0.78
SCN11AQ9UI33 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC19.93■□□□□ 0.78
SCN11AQ9UI33 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC19.93■□□□□ 0.78
SCN11AQ9UI33 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC19.93■□□□□ 0.78
SCN11AQ9UI33 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC19.93■□□□□ 0.78
SCN11AQ9UI33 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC19.93■□□□□ 0.78
SCN11AQ9UI33 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
SCN11AQ9UI33 AC023310.1-201ENST00000554836 735 ntBASIC19.93■□□□□ 0.78
SCN11AQ9UI33 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC19.93■□□□□ 0.78
SCN11AQ9UI33 PPY2P-201ENST00000582808 702 ntBASIC19.93■□□□□ 0.78
SCN11AQ9UI33 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SCN11AQ9UI33 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
SCN11AQ9UI33 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
SCN11AQ9UI33 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms