Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HMG20BQ9P0W2 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC19.26■□□□□ 0.67
HMG20BQ9P0W2 EHF-205ENST00000527935 557 ntTSL 2 BASIC19.26■□□□□ 0.67
HMG20BQ9P0W2 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC19.26■□□□□ 0.67
HMG20BQ9P0W2 AC123567.1-201ENST00000548294 1261 ntBASIC19.26■□□□□ 0.67
HMG20BQ9P0W2 CTBP2P3-201ENST00000585629 1255 ntBASIC19.26■□□□□ 0.67
HMG20BQ9P0W2 AL158212.4-201ENST00000624062 1286 ntBASIC19.26■□□□□ 0.67
HMG20BQ9P0W2 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HMG20BQ9P0W2 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HMG20BQ9P0W2 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
HMG20BQ9P0W2 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HMG20BQ9P0W2 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HMG20BQ9P0W2 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HMG20BQ9P0W2 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HMG20BQ9P0W2 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
HMG20BQ9P0W2 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HMG20BQ9P0W2 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
HMG20BQ9P0W2 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HMG20BQ9P0W2 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
HMG20BQ9P0W2 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
HMG20BQ9P0W2 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HMG20BQ9P0W2 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC19.26■□□□□ 0.67
HMG20BQ9P0W2 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
HMG20BQ9P0W2 ABR-203ENST00000536794 2213 ntTSL 2 BASIC19.25■□□□□ 0.67
HMG20BQ9P0W2 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HMG20BQ9P0W2 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC19.25■□□□□ 0.67
HMG20BQ9P0W2 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
HMG20BQ9P0W2 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HMG20BQ9P0W2 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
HMG20BQ9P0W2 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HMG20BQ9P0W2 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HMG20BQ9P0W2 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
HMG20BQ9P0W2 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HMG20BQ9P0W2 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC19.25■□□□□ 0.67
HMG20BQ9P0W2 AC138969.3-201ENST00000546612 1459 ntBASIC19.25■□□□□ 0.67
HMG20BQ9P0W2 AC138932.2-201ENST00000548268 1459 ntBASIC19.25■□□□□ 0.67
HMG20BQ9P0W2 AC126755.4-201ENST00000549796 1459 ntBASIC19.25■□□□□ 0.67
HMG20BQ9P0W2 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
HMG20BQ9P0W2 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HMG20BQ9P0W2 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HMG20BQ9P0W2 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HMG20BQ9P0W2 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC19.25■□□□□ 0.67
HMG20BQ9P0W2 WBP2-203ENST00000433525 928 ntTSL 2 BASIC19.25■□□□□ 0.67
HMG20BQ9P0W2 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC19.25■□□□□ 0.67
HMG20BQ9P0W2 USP40-206ENST00000443711 628 ntTSL 2 BASIC19.25■□□□□ 0.67
HMG20BQ9P0W2 MYCLP2-201ENST00000449268 967 ntBASIC19.25■□□□□ 0.67
HMG20BQ9P0W2 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC19.25■□□□□ 0.67
HMG20BQ9P0W2 ELK1P1-201ENST00000485699 580 ntBASIC19.25■□□□□ 0.67
HMG20BQ9P0W2 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
HMG20BQ9P0W2 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC19.25■□□□□ 0.67
HMG20BQ9P0W2 CR383656.12-201ENST00000549567 513 ntBASIC19.25■□□□□ 0.67
HMG20BQ9P0W2 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC19.25■□□□□ 0.67
HMG20BQ9P0W2 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC19.25■□□□□ 0.67
HMG20BQ9P0W2 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC19.25■□□□□ 0.67
HMG20BQ9P0W2 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HMG20BQ9P0W2 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
HMG20BQ9P0W2 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HMG20BQ9P0W2 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HMG20BQ9P0W2 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC19.25■□□□□ 0.67
HMG20BQ9P0W2 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HMG20BQ9P0W2 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC19.25■□□□□ 0.67
HMG20BQ9P0W2 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC19.25■□□□□ 0.67
HMG20BQ9P0W2 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC19.25■□□□□ 0.67
HMG20BQ9P0W2 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC19.25■□□□□ 0.67
HMG20BQ9P0W2 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
HMG20BQ9P0W2 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC19.25■□□□□ 0.67
HMG20BQ9P0W2 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HMG20BQ9P0W2 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
HMG20BQ9P0W2 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC19.24■□□□□ 0.67
HMG20BQ9P0W2 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HMG20BQ9P0W2 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC19.24■□□□□ 0.67
HMG20BQ9P0W2 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HMG20BQ9P0W2 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HMG20BQ9P0W2 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC19.24■□□□□ 0.67
HMG20BQ9P0W2 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
HMG20BQ9P0W2 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
HMG20BQ9P0W2 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HMG20BQ9P0W2 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HMG20BQ9P0W2 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
HMG20BQ9P0W2 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HMG20BQ9P0W2 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
HMG20BQ9P0W2 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC19.24■□□□□ 0.67
HMG20BQ9P0W2 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC19.24■□□□□ 0.67
HMG20BQ9P0W2 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC19.24■□□□□ 0.67
HMG20BQ9P0W2 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC19.24■□□□□ 0.67
HMG20BQ9P0W2 RRP7BP-205ENST00000566851 833 ntBASIC19.24■□□□□ 0.67
HMG20BQ9P0W2 AC093726.1-201ENST00000608064 963 ntBASIC19.24■□□□□ 0.67
HMG20BQ9P0W2 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
HMG20BQ9P0W2 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
HMG20BQ9P0W2 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
HMG20BQ9P0W2 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC19.24■□□□□ 0.67
HMG20BQ9P0W2 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
HMG20BQ9P0W2 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
HMG20BQ9P0W2 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC19.24■□□□□ 0.67
HMG20BQ9P0W2 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HMG20BQ9P0W2 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HMG20BQ9P0W2 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HMG20BQ9P0W2 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC19.24■□□□□ 0.67
HMG20BQ9P0W2 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HMG20BQ9P0W2 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms