Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SDHAF3Q9NRP4 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
SDHAF3Q9NRP4 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SDHAF3Q9NRP4 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SDHAF3Q9NRP4 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SDHAF3Q9NRP4 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
SDHAF3Q9NRP4 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SDHAF3Q9NRP4 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.63□□□□□ -0.07
SDHAF3Q9NRP4 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.63□□□□□ -0.07
SDHAF3Q9NRP4 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.62□□□□□ -0.07
SDHAF3Q9NRP4 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.62□□□□□ -0.07
SDHAF3Q9NRP4 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
SDHAF3Q9NRP4 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.62□□□□□ -0.07
SDHAF3Q9NRP4 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.62□□□□□ -0.07
SDHAF3Q9NRP4 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SDHAF3Q9NRP4 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SDHAF3Q9NRP4 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SDHAF3Q9NRP4 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SDHAF3Q9NRP4 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SDHAF3Q9NRP4 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SDHAF3Q9NRP4 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.62□□□□□ -0.07
SDHAF3Q9NRP4 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SDHAF3Q9NRP4 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.62□□□□□ -0.07
SDHAF3Q9NRP4 EEF1DP4-201ENST00000446006 880 ntBASIC14.62□□□□□ -0.07
SDHAF3Q9NRP4 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.62□□□□□ -0.07
SDHAF3Q9NRP4 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.62□□□□□ -0.07
SDHAF3Q9NRP4 PHKG1P2-201ENST00000457537 863 ntBASIC14.62□□□□□ -0.07
SDHAF3Q9NRP4 CYMP-203ENST00000474680 1263 ntBASIC14.62□□□□□ -0.07
SDHAF3Q9NRP4 RNA5SP421-201ENST00000516864 134 ntBASIC14.62□□□□□ -0.07
SDHAF3Q9NRP4 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.62□□□□□ -0.07
SDHAF3Q9NRP4 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.62□□□□□ -0.07
SDHAF3Q9NRP4 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.62□□□□□ -0.07
SDHAF3Q9NRP4 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.62□□□□□ -0.07
SDHAF3Q9NRP4 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.62□□□□□ -0.07
SDHAF3Q9NRP4 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.62□□□□□ -0.07
SDHAF3Q9NRP4 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SDHAF3Q9NRP4 AC027796.2-201ENST00000575326 344 ntBASIC14.62□□□□□ -0.07
SDHAF3Q9NRP4 AL450472.2-201ENST00000603663 1156 ntBASIC14.62□□□□□ -0.07
SDHAF3Q9NRP4 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.62□□□□□ -0.07
SDHAF3Q9NRP4 SPDYE12P-201ENST00000618416 771 ntBASIC14.62□□□□□ -0.07
SDHAF3Q9NRP4 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
SDHAF3Q9NRP4 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.62□□□□□ -0.07
SDHAF3Q9NRP4 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
SDHAF3Q9NRP4 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
SDHAF3Q9NRP4 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.62□□□□□ -0.07
SDHAF3Q9NRP4 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.62□□□□□ -0.07
SDHAF3Q9NRP4 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
SDHAF3Q9NRP4 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.61□□□□□ -0.07
SDHAF3Q9NRP4 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
SDHAF3Q9NRP4 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
SDHAF3Q9NRP4 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SDHAF3Q9NRP4 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
SDHAF3Q9NRP4 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SDHAF3Q9NRP4 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.61□□□□□ -0.07
SDHAF3Q9NRP4 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
SDHAF3Q9NRP4 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SDHAF3Q9NRP4 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SDHAF3Q9NRP4 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
SDHAF3Q9NRP4 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
SDHAF3Q9NRP4 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SDHAF3Q9NRP4 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SDHAF3Q9NRP4 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SDHAF3Q9NRP4 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
SDHAF3Q9NRP4 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.61□□□□□ -0.07
SDHAF3Q9NRP4 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SDHAF3Q9NRP4 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SDHAF3Q9NRP4 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
SDHAF3Q9NRP4 RPL37AP1-201ENST00000412502 279 ntBASIC14.61□□□□□ -0.07
SDHAF3Q9NRP4 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.61□□□□□ -0.07
SDHAF3Q9NRP4 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.61□□□□□ -0.07
SDHAF3Q9NRP4 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.61□□□□□ -0.07
SDHAF3Q9NRP4 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.61□□□□□ -0.07
SDHAF3Q9NRP4 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.61□□□□□ -0.07
SDHAF3Q9NRP4 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.61□□□□□ -0.07
SDHAF3Q9NRP4 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SDHAF3Q9NRP4 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
SDHAF3Q9NRP4 AL603832.2-201ENST00000566195 2125 ntBASIC14.61□□□□□ -0.07
SDHAF3Q9NRP4 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.61□□□□□ -0.07
SDHAF3Q9NRP4 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.61□□□□□ -0.07
SDHAF3Q9NRP4 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.61□□□□□ -0.07
SDHAF3Q9NRP4 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.61□□□□□ -0.07
SDHAF3Q9NRP4 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SDHAF3Q9NRP4 REXO1L1P-202ENST00000608646 1974 ntBASIC14.61□□□□□ -0.07
SDHAF3Q9NRP4 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
SDHAF3Q9NRP4 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SDHAF3Q9NRP4 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SDHAF3Q9NRP4 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SDHAF3Q9NRP4 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SDHAF3Q9NRP4 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.61□□□□□ -0.07
SDHAF3Q9NRP4 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SDHAF3Q9NRP4 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
SDHAF3Q9NRP4 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SDHAF3Q9NRP4 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
SDHAF3Q9NRP4 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SDHAF3Q9NRP4 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
SDHAF3Q9NRP4 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SDHAF3Q9NRP4 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
SDHAF3Q9NRP4 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SDHAF3Q9NRP4 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SDHAF3Q9NRP4 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms