Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
RTN4Q9NQC3 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTN4Q9NQC3 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC18.93■□□□□ 0.62
RTN4Q9NQC3 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTN4Q9NQC3 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RTN4Q9NQC3 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTN4Q9NQC3 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTN4Q9NQC3 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTN4Q9NQC3 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC18.92■□□□□ 0.62
RTN4Q9NQC3 AL645728.1-201ENST00000366221 2101 ntBASIC18.92■□□□□ 0.62
RTN4Q9NQC3 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTN4Q9NQC3 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTN4Q9NQC3 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
RTN4Q9NQC3 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
RTN4Q9NQC3 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTN4Q9NQC3 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RTN4Q9NQC3 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTN4Q9NQC3 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTN4Q9NQC3 FRMD8P1-201ENST00000440433 1524 ntBASIC18.92■□□□□ 0.62
RTN4Q9NQC3 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTN4Q9NQC3 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTN4Q9NQC3 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.92■□□□□ 0.62
RTN4Q9NQC3 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.92■□□□□ 0.62
RTN4Q9NQC3 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.92■□□□□ 0.62
RTN4Q9NQC3 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC18.92■□□□□ 0.62
RTN4Q9NQC3 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.92■□□□□ 0.62
RTN4Q9NQC3 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.92■□□□□ 0.62
RTN4Q9NQC3 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RTN4Q9NQC3 AL592071.1-201ENST00000611956 408 ntBASIC18.92■□□□□ 0.62
RTN4Q9NQC3 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
RTN4Q9NQC3 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
RTN4Q9NQC3 AC124864.1-201ENST00000623408 392 ntBASIC18.92■□□□□ 0.62
RTN4Q9NQC3 AC073912.3-201ENST00000624414 853 ntBASIC18.92■□□□□ 0.62
RTN4Q9NQC3 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC18.92■□□□□ 0.62
RTN4Q9NQC3 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTN4Q9NQC3 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RTN4Q9NQC3 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RTN4Q9NQC3 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC18.92■□□□□ 0.62
RTN4Q9NQC3 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTN4Q9NQC3 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC18.92■□□□□ 0.62
RTN4Q9NQC3 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
RTN4Q9NQC3 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC18.92■□□□□ 0.62
RTN4Q9NQC3 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTN4Q9NQC3 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTN4Q9NQC3 FAM106A-201ENST00000392176 2281 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
RTN4Q9NQC3 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RTN4Q9NQC3 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC18.91■□□□□ 0.62
RTN4Q9NQC3 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
RTN4Q9NQC3 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RTN4Q9NQC3 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
RTN4Q9NQC3 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RTN4Q9NQC3 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
RTN4Q9NQC3 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RTN4Q9NQC3 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
RTN4Q9NQC3 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
RTN4Q9NQC3 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RTN4Q9NQC3 FAM220CP-201ENST00000395253 831 ntBASIC18.91■□□□□ 0.62
RTN4Q9NQC3 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.91■□□□□ 0.62
RTN4Q9NQC3 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.91■□□□□ 0.62
RTN4Q9NQC3 AC253576.1-201ENST00000511645 1156 ntBASIC18.91■□□□□ 0.62
RTN4Q9NQC3 AC087273.1-201ENST00000519368 529 ntTSL 2 BASIC18.91■□□□□ 0.62
RTN4Q9NQC3 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.91■□□□□ 0.62
RTN4Q9NQC3 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.91■□□□□ 0.62
RTN4Q9NQC3 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.91■□□□□ 0.62
RTN4Q9NQC3 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.91■□□□□ 0.62
RTN4Q9NQC3 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RTN4Q9NQC3 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.91■□□□□ 0.62
RTN4Q9NQC3 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RTN4Q9NQC3 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.91■□□□□ 0.62
RTN4Q9NQC3 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.91■□□□□ 0.62
RTN4Q9NQC3 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.91■□□□□ 0.62
RTN4Q9NQC3 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC18.91■□□□□ 0.62
RTN4Q9NQC3 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RTN4Q9NQC3 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RTN4Q9NQC3 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RTN4Q9NQC3 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RTN4Q9NQC3 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RTN4Q9NQC3 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC18.91■□□□□ 0.62
RTN4Q9NQC3 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RTN4Q9NQC3 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RTN4Q9NQC3 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
RTN4Q9NQC3 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
RTN4Q9NQC3 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
RTN4Q9NQC3 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
RTN4Q9NQC3 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC18.91■□□□□ 0.62
RTN4Q9NQC3 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTN4Q9NQC3 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC18.9■□□□□ 0.62
RTN4Q9NQC3 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.9■□□□□ 0.62
RTN4Q9NQC3 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RTN4Q9NQC3 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTN4Q9NQC3 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.9■□□□□ 0.62
RTN4Q9NQC3 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTN4Q9NQC3 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.9■□□□□ 0.62
RTN4Q9NQC3 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
RTN4Q9NQC3 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTN4Q9NQC3 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTN4Q9NQC3 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTN4Q9NQC3 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RTN4Q9NQC3 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTN4Q9NQC3 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms