Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
VTA1Q9NP79 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.62■□□□□ 0.41
VTA1Q9NP79 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VTA1Q9NP79 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.61■□□□□ 0.41
VTA1Q9NP79 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC17.61■□□□□ 0.41
VTA1Q9NP79 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VTA1Q9NP79 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC17.61■□□□□ 0.41
VTA1Q9NP79 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VTA1Q9NP79 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.61■□□□□ 0.41
VTA1Q9NP79 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VTA1Q9NP79 PGGT1BP2-201ENST00000398621 1028 ntBASIC17.61■□□□□ 0.41
VTA1Q9NP79 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
VTA1Q9NP79 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC17.61■□□□□ 0.41
VTA1Q9NP79 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VTA1Q9NP79 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
VTA1Q9NP79 RPL8-205ENST00000527914 551 ntTSL 3 BASIC17.61■□□□□ 0.41
VTA1Q9NP79 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VTA1Q9NP79 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC17.61■□□□□ 0.41
VTA1Q9NP79 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC17.61■□□□□ 0.41
VTA1Q9NP79 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC17.61■□□□□ 0.41
VTA1Q9NP79 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC17.61■□□□□ 0.41
VTA1Q9NP79 LARP4-220ENST00000615080 856 ntTSL 5 BASIC17.61■□□□□ 0.41
VTA1Q9NP79 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
VTA1Q9NP79 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VTA1Q9NP79 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VTA1Q9NP79 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VTA1Q9NP79 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
VTA1Q9NP79 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VTA1Q9NP79 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VTA1Q9NP79 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VTA1Q9NP79 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC17.61■□□□□ 0.41
VTA1Q9NP79 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.61■□□□□ 0.41
VTA1Q9NP79 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
VTA1Q9NP79 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
VTA1Q9NP79 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.61■□□□□ 0.41
VTA1Q9NP79 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
VTA1Q9NP79 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.61■□□□□ 0.41
VTA1Q9NP79 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
VTA1Q9NP79 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VTA1Q9NP79 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VTA1Q9NP79 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
VTA1Q9NP79 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
VTA1Q9NP79 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VTA1Q9NP79 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VTA1Q9NP79 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.6■□□□□ 0.41
VTA1Q9NP79 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
VTA1Q9NP79 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VTA1Q9NP79 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
VTA1Q9NP79 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC17.6■□□□□ 0.41
VTA1Q9NP79 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
VTA1Q9NP79 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC17.6■□□□□ 0.41
VTA1Q9NP79 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC17.6■□□□□ 0.41
VTA1Q9NP79 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VTA1Q9NP79 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC17.6■□□□□ 0.41
VTA1Q9NP79 AP005019.2-201ENST00000615104 511 ntBASIC17.6■□□□□ 0.41
VTA1Q9NP79 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VTA1Q9NP79 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VTA1Q9NP79 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC17.6■□□□□ 0.41
VTA1Q9NP79 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VTA1Q9NP79 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VTA1Q9NP79 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.6■□□□□ 0.41
VTA1Q9NP79 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VTA1Q9NP79 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VTA1Q9NP79 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VTA1Q9NP79 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
VTA1Q9NP79 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
VTA1Q9NP79 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.6■□□□□ 0.41
VTA1Q9NP79 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VTA1Q9NP79 AC099398.1-201ENST00000567919 2776 ntBASIC17.6■□□□□ 0.41
VTA1Q9NP79 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
VTA1Q9NP79 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VTA1Q9NP79 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VTA1Q9NP79 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VTA1Q9NP79 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.59■□□□□ 0.41
VTA1Q9NP79 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VTA1Q9NP79 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.59■□□□□ 0.41
VTA1Q9NP79 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
VTA1Q9NP79 POLL-217ENST00000628479 1953 ntTSL 5 BASIC17.59■□□□□ 0.41
VTA1Q9NP79 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
VTA1Q9NP79 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
VTA1Q9NP79 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
VTA1Q9NP79 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC17.59■□□□□ 0.41
VTA1Q9NP79 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
VTA1Q9NP79 MTHFR-217ENST00000641820 1569 ntBASIC17.59■□□□□ 0.41
VTA1Q9NP79 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VTA1Q9NP79 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VTA1Q9NP79 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
VTA1Q9NP79 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VTA1Q9NP79 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VTA1Q9NP79 CNN2P8-201ENST00000421872 913 ntBASIC17.59■□□□□ 0.41
VTA1Q9NP79 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC17.59■□□□□ 0.41
VTA1Q9NP79 AC026954.1-201ENST00000429771 1293 ntBASIC17.59■□□□□ 0.41
VTA1Q9NP79 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC17.59■□□□□ 0.41
VTA1Q9NP79 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
VTA1Q9NP79 USB1-203ENST00000539737 1212 ntTSL 2 BASIC17.59■□□□□ 0.41
VTA1Q9NP79 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC17.59■□□□□ 0.41
VTA1Q9NP79 AC025279.2-201ENST00000569730 653 ntBASIC17.59■□□□□ 0.41
VTA1Q9NP79 AC010328.2-201ENST00000597698 1111 ntBASIC17.59■□□□□ 0.41
VTA1Q9NP79 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC17.59■□□□□ 0.41
VTA1Q9NP79 AC008687.7-202ENST00000637404 953 ntBASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms