Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 GPER1-207ENST00000619052 571 ntTSL 2 BASIC13.63□□□□□ -0.23
GCM1Q9NP62 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GCM1Q9NP62 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC13.63□□□□□ -0.23
GCM1Q9NP62 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
GCM1Q9NP62 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
GCM1Q9NP62 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
GCM1Q9NP62 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GCM1Q9NP62 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC13.63□□□□□ -0.23
GCM1Q9NP62 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
GCM1Q9NP62 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GCM1Q9NP62 MYB-201ENST00000316528 3571 ntTSL 5 BASIC13.63□□□□□ -0.23
GCM1Q9NP62 MYB-241ENST00000616088 3573 ntTSL 5 BASIC13.63□□□□□ -0.23
GCM1Q9NP62 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
GCM1Q9NP62 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GCM1Q9NP62 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC13.63□□□□□ -0.23
GCM1Q9NP62 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
GCM1Q9NP62 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GCM1Q9NP62 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GCM1Q9NP62 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
GCM1Q9NP62 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
GCM1Q9NP62 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GCM1Q9NP62 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GCM1Q9NP62 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
GCM1Q9NP62 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GCM1Q9NP62 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
GCM1Q9NP62 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.62□□□□□ -0.23
GCM1Q9NP62 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
GCM1Q9NP62 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GCM1Q9NP62 AL136982.4-201ENST00000437689 1740 ntBASIC13.62□□□□□ -0.23
GCM1Q9NP62 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
GCM1Q9NP62 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GCM1Q9NP62 FO538757.1-201ENST00000623083 1397 ntBASIC13.62□□□□□ -0.23
GCM1Q9NP62 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC13.62□□□□□ -0.23
GCM1Q9NP62 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
GCM1Q9NP62 FRMD6-AS1-201ENST00000617151 2229 ntBASIC13.62□□□□□ -0.23
GCM1Q9NP62 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GCM1Q9NP62 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC13.62□□□□□ -0.23
GCM1Q9NP62 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
GCM1Q9NP62 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GCM1Q9NP62 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
GCM1Q9NP62 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC13.62□□□□□ -0.23
GCM1Q9NP62 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
GCM1Q9NP62 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
GCM1Q9NP62 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
GCM1Q9NP62 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC13.62□□□□□ -0.23
GCM1Q9NP62 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
GCM1Q9NP62 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
GCM1Q9NP62 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GCM1Q9NP62 TREML5P-201ENST00000421694 576 ntBASIC13.62□□□□□ -0.23
GCM1Q9NP62 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC13.62□□□□□ -0.23
GCM1Q9NP62 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GCM1Q9NP62 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
GCM1Q9NP62 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC13.62□□□□□ -0.23
GCM1Q9NP62 AC243562.2-201ENST00000561247 970 ntBASIC13.62□□□□□ -0.23
GCM1Q9NP62 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.62□□□□□ -0.23
GCM1Q9NP62 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC13.62□□□□□ -0.23
GCM1Q9NP62 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13.62□□□□□ -0.23
GCM1Q9NP62 AL589739.1-201ENST00000607720 493 ntBASIC13.62□□□□□ -0.23
GCM1Q9NP62 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
GCM1Q9NP62 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
GCM1Q9NP62 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
GCM1Q9NP62 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GCM1Q9NP62 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
GCM1Q9NP62 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC13.62□□□□□ -0.23
GCM1Q9NP62 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC13.62□□□□□ -0.23
GCM1Q9NP62 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
GCM1Q9NP62 AL691432.1-201ENST00000596308 1422 ntBASIC13.62□□□□□ -0.23
GCM1Q9NP62 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GCM1Q9NP62 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
GCM1Q9NP62 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC13.62□□□□□ -0.23
GCM1Q9NP62 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
GCM1Q9NP62 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC13.62□□□□□ -0.23
GCM1Q9NP62 CETN4P-206ENST00000642099 2168 ntBASIC13.62□□□□□ -0.23
GCM1Q9NP62 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GCM1Q9NP62 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
GCM1Q9NP62 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GCM1Q9NP62 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
GCM1Q9NP62 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC13.61□□□□□ -0.23
GCM1Q9NP62 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GCM1Q9NP62 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GCM1Q9NP62 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
GCM1Q9NP62 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
GCM1Q9NP62 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
GCM1Q9NP62 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
GCM1Q9NP62 FUK-207ENST00000571514 3054 ntTSL 2 BASIC13.61□□□□□ -0.23
GCM1Q9NP62 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GCM1Q9NP62 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
GCM1Q9NP62 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
GCM1Q9NP62 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC13.61□□□□□ -0.23
GCM1Q9NP62 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GCM1Q9NP62 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GCM1Q9NP62 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
GCM1Q9NP62 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC13.61□□□□□ -0.23
GCM1Q9NP62 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC13.61□□□□□ -0.23
GCM1Q9NP62 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC13.61□□□□□ -0.23
GCM1Q9NP62 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GCM1Q9NP62 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
GCM1Q9NP62 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC13.61□□□□□ -0.23
GCM1Q9NP62 AC055876.3-201ENST00000431496 288 ntBASIC13.61□□□□□ -0.23
GCM1Q9NP62 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms