Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC13.41□□□□□ -0.26
PCGF1Q9BSM1 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
PCGF1Q9BSM1 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
PCGF1Q9BSM1 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
PCGF1Q9BSM1 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC13.41□□□□□ -0.26
PCGF1Q9BSM1 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
PCGF1Q9BSM1 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
PCGF1Q9BSM1 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
PCGF1Q9BSM1 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
PCGF1Q9BSM1 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
PCGF1Q9BSM1 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC13.41□□□□□ -0.26
PCGF1Q9BSM1 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC13.41□□□□□ -0.26
PCGF1Q9BSM1 HNRNPA1P40-201ENST00000426371 1278 ntBASIC13.41□□□□□ -0.26
PCGF1Q9BSM1 FAM8A3P-201ENST00000427218 844 ntBASIC13.41□□□□□ -0.26
PCGF1Q9BSM1 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC13.41□□□□□ -0.26
PCGF1Q9BSM1 MTND6P24-201ENST00000440466 518 ntBASIC13.41□□□□□ -0.26
PCGF1Q9BSM1 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.41□□□□□ -0.26
PCGF1Q9BSM1 AC093724.1-201ENST00000448659 1027 ntBASIC13.41□□□□□ -0.26
PCGF1Q9BSM1 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
PCGF1Q9BSM1 AL512638.1-201ENST00000457493 794 ntBASIC13.41□□□□□ -0.26
PCGF1Q9BSM1 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
PCGF1Q9BSM1 INGX-202ENST00000489074 768 ntBASIC13.41□□□□□ -0.26
PCGF1Q9BSM1 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.41□□□□□ -0.26
PCGF1Q9BSM1 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC13.41□□□□□ -0.26
PCGF1Q9BSM1 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC13.41□□□□□ -0.26
PCGF1Q9BSM1 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC13.41□□□□□ -0.26
PCGF1Q9BSM1 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC13.41□□□□□ -0.26
PCGF1Q9BSM1 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
PCGF1Q9BSM1 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
PCGF1Q9BSM1 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC13.41□□□□□ -0.26
PCGF1Q9BSM1 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
PCGF1Q9BSM1 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
PCGF1Q9BSM1 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC13.41□□□□□ -0.26
PCGF1Q9BSM1 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
PCGF1Q9BSM1 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC13.41□□□□□ -0.26
PCGF1Q9BSM1 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
PCGF1Q9BSM1 ING5-213ENST00000636051 4199 ntTSL 5 BASIC13.41□□□□□ -0.26
PCGF1Q9BSM1 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
PCGF1Q9BSM1 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
PCGF1Q9BSM1 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
PCGF1Q9BSM1 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
PCGF1Q9BSM1 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
PCGF1Q9BSM1 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
PCGF1Q9BSM1 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PCGF1Q9BSM1 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PCGF1Q9BSM1 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
PCGF1Q9BSM1 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
PCGF1Q9BSM1 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC13.4□□□□□ -0.26
PCGF1Q9BSM1 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC13.4□□□□□ -0.26
PCGF1Q9BSM1 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PCGF1Q9BSM1 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC13.4□□□□□ -0.26
PCGF1Q9BSM1 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC13.4□□□□□ -0.26
PCGF1Q9BSM1 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PCGF1Q9BSM1 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
PCGF1Q9BSM1 FAM220BP-201ENST00000377689 816 ntBASIC13.4□□□□□ -0.26
PCGF1Q9BSM1 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC13.4□□□□□ -0.26
PCGF1Q9BSM1 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
PCGF1Q9BSM1 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC13.4□□□□□ -0.26
PCGF1Q9BSM1 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC13.4□□□□□ -0.26
PCGF1Q9BSM1 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PCGF1Q9BSM1 MAX-210ENST00000555419 765 ntTSL 5 BASIC13.4□□□□□ -0.26
PCGF1Q9BSM1 SPCS2P1-201ENST00000561636 679 ntBASIC13.4□□□□□ -0.26
PCGF1Q9BSM1 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13.4□□□□□ -0.26
PCGF1Q9BSM1 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC13.4□□□□□ -0.26
PCGF1Q9BSM1 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
PCGF1Q9BSM1 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PCGF1Q9BSM1 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
PCGF1Q9BSM1 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PCGF1Q9BSM1 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PCGF1Q9BSM1 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC13.4□□□□□ -0.26
PCGF1Q9BSM1 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
PCGF1Q9BSM1 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PCGF1Q9BSM1 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC13.4□□□□□ -0.26
PCGF1Q9BSM1 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC13.4□□□□□ -0.26
PCGF1Q9BSM1 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC13.4□□□□□ -0.26
PCGF1Q9BSM1 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
PCGF1Q9BSM1 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC13.4□□□□□ -0.26
PCGF1Q9BSM1 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
PCGF1Q9BSM1 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
PCGF1Q9BSM1 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
PCGF1Q9BSM1 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
PCGF1Q9BSM1 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
PCGF1Q9BSM1 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
PCGF1Q9BSM1 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC13.39□□□□□ -0.27
PCGF1Q9BSM1 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
PCGF1Q9BSM1 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
PCGF1Q9BSM1 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
PCGF1Q9BSM1 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
PCGF1Q9BSM1 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
PCGF1Q9BSM1 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
PCGF1Q9BSM1 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
PCGF1Q9BSM1 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
PCGF1Q9BSM1 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.39□□□□□ -0.27
PCGF1Q9BSM1 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC13.39□□□□□ -0.27
PCGF1Q9BSM1 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC13.39□□□□□ -0.27
PCGF1Q9BSM1 AC027369.6-201ENST00000525520 931 ntBASIC13.39□□□□□ -0.27
PCGF1Q9BSM1 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
PCGF1Q9BSM1 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC13.39□□□□□ -0.27
PCGF1Q9BSM1 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC13.39□□□□□ -0.27
PCGF1Q9BSM1 AC024267.1-201ENST00000582320 895 ntBASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms