Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC16.05■□□□□ 0.16
NOTCH4Q99466 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NOTCH4Q99466 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.05■□□□□ 0.16
NOTCH4Q99466 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
NOTCH4Q99466 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NOTCH4Q99466 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
NOTCH4Q99466 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NOTCH4Q99466 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.05■□□□□ 0.16
NOTCH4Q99466 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC16.05■□□□□ 0.16
NOTCH4Q99466 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NOTCH4Q99466 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC16.05■□□□□ 0.16
NOTCH4Q99466 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC16.05■□□□□ 0.16
NOTCH4Q99466 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
NOTCH4Q99466 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC16.05■□□□□ 0.16
NOTCH4Q99466 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC16.05■□□□□ 0.16
NOTCH4Q99466 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NOTCH4Q99466 LINC02447-202ENST00000501888 2146 ntBASIC16.05■□□□□ 0.16
NOTCH4Q99466 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NOTCH4Q99466 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NOTCH4Q99466 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
NOTCH4Q99466 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.05■□□□□ 0.16
NOTCH4Q99466 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
NOTCH4Q99466 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NOTCH4Q99466 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NOTCH4Q99466 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NOTCH4Q99466 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NOTCH4Q99466 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.04■□□□□ 0.16
NOTCH4Q99466 AHCYP2-201ENST00000430630 1300 ntBASIC16.04■□□□□ 0.16
NOTCH4Q99466 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.04■□□□□ 0.16
NOTCH4Q99466 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
NOTCH4Q99466 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC16.04■□□□□ 0.16
NOTCH4Q99466 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC16.04■□□□□ 0.16
NOTCH4Q99466 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC16.04■□□□□ 0.16
NOTCH4Q99466 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC16.04■□□□□ 0.16
NOTCH4Q99466 AC106820.3-201ENST00000561653 397 ntBASIC16.04■□□□□ 0.16
NOTCH4Q99466 AC005730.2-201ENST00000564549 1184 ntBASIC16.04■□□□□ 0.16
NOTCH4Q99466 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC16.04■□□□□ 0.16
NOTCH4Q99466 AC084346.2-201ENST00000607097 949 ntBASIC16.04■□□□□ 0.16
NOTCH4Q99466 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.04■□□□□ 0.16
NOTCH4Q99466 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.04■□□□□ 0.16
NOTCH4Q99466 AL158070.2-201ENST00000623713 1621 ntBASIC16.04■□□□□ 0.16
NOTCH4Q99466 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
NOTCH4Q99466 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.04■□□□□ 0.16
NOTCH4Q99466 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.04■□□□□ 0.16
NOTCH4Q99466 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
NOTCH4Q99466 AL354989.2-201ENST00000435838 1540 ntBASIC16.04■□□□□ 0.16
NOTCH4Q99466 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
NOTCH4Q99466 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NOTCH4Q99466 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.04■□□□□ 0.16
NOTCH4Q99466 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.04■□□□□ 0.16
NOTCH4Q99466 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NOTCH4Q99466 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.04■□□□□ 0.16
NOTCH4Q99466 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NOTCH4Q99466 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
NOTCH4Q99466 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
NOTCH4Q99466 AL139094.1-201ENST00000405549 1188 ntBASIC16.04■□□□□ 0.16
NOTCH4Q99466 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC16.04■□□□□ 0.16
NOTCH4Q99466 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC16.04■□□□□ 0.16
NOTCH4Q99466 APOA2-204ENST00000464492 530 ntTSL 3 BASIC16.04■□□□□ 0.16
NOTCH4Q99466 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC16.04■□□□□ 0.16
NOTCH4Q99466 NEU3-202ENST00000526068 431 ntTSL 2 BASIC16.04■□□□□ 0.16
NOTCH4Q99466 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.04■□□□□ 0.16
NOTCH4Q99466 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
NOTCH4Q99466 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.04■□□□□ 0.16
NOTCH4Q99466 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC16.04■□□□□ 0.16
NOTCH4Q99466 AP006547.1-201ENST00000563435 692 ntBASIC16.04■□□□□ 0.16
NOTCH4Q99466 AC091271.1-201ENST00000611877 1162 ntBASIC16.04■□□□□ 0.16
NOTCH4Q99466 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NOTCH4Q99466 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
NOTCH4Q99466 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
NOTCH4Q99466 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.04■□□□□ 0.16
NOTCH4Q99466 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NOTCH4Q99466 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NOTCH4Q99466 AC009090.5-201ENST00000624886 2285 ntBASIC16.03■□□□□ 0.16
NOTCH4Q99466 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.03■□□□□ 0.16
NOTCH4Q99466 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NOTCH4Q99466 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
NOTCH4Q99466 KRT8P14-201ENST00000414254 1442 ntBASIC16.03■□□□□ 0.16
NOTCH4Q99466 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
NOTCH4Q99466 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.03■□□□□ 0.16
NOTCH4Q99466 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.03■□□□□ 0.16
NOTCH4Q99466 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
NOTCH4Q99466 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC16.03■□□□□ 0.16
NOTCH4Q99466 AL596087.1-201ENST00000400979 1969 ntBASIC16.03■□□□□ 0.16
NOTCH4Q99466 AC024909.3-201ENST00000611513 2257 ntBASIC16.03■□□□□ 0.16
NOTCH4Q99466 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NOTCH4Q99466 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NOTCH4Q99466 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.03■□□□□ 0.16
NOTCH4Q99466 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.03■□□□□ 0.16
NOTCH4Q99466 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC16.03■□□□□ 0.16
NOTCH4Q99466 Z93015.1-201ENST00000451718 390 ntBASIC16.03■□□□□ 0.16
NOTCH4Q99466 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC16.03■□□□□ 0.16
NOTCH4Q99466 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC16.03■□□□□ 0.16
NOTCH4Q99466 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC16.03■□□□□ 0.16
NOTCH4Q99466 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC16.03■□□□□ 0.16
NOTCH4Q99466 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC16.03■□□□□ 0.16
NOTCH4Q99466 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC16.03■□□□□ 0.16
NOTCH4Q99466 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.03■□□□□ 0.16
NOTCH4Q99466 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NOTCH4Q99466 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms