Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 KLF2P4-201ENST00000451959 1225 ntBASIC18.56■□□□□ 0.56
TRIM47Q96LD4 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC18.56■□□□□ 0.56
TRIM47Q96LD4 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM47Q96LD4 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
TRIM47Q96LD4 SLC25A47P1-201ENST00000531577 414 ntBASIC18.56■□□□□ 0.56
TRIM47Q96LD4 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC18.56■□□□□ 0.56
TRIM47Q96LD4 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM47Q96LD4 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC18.56■□□□□ 0.56
TRIM47Q96LD4 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM47Q96LD4 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM47Q96LD4 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM47Q96LD4 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC18.56■□□□□ 0.56
TRIM47Q96LD4 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC18.56■□□□□ 0.56
TRIM47Q96LD4 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM47Q96LD4 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM47Q96LD4 GCK-209ENST00000616242 2260 ntTSL 5 BASIC18.56■□□□□ 0.56
TRIM47Q96LD4 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM47Q96LD4 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM47Q96LD4 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC18.55■□□□□ 0.56
TRIM47Q96LD4 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC18.55■□□□□ 0.56
TRIM47Q96LD4 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
TRIM47Q96LD4 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
TRIM47Q96LD4 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM47Q96LD4 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM47Q96LD4 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM47Q96LD4 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
TRIM47Q96LD4 TUBB1P2-201ENST00000422712 1306 ntBASIC18.55■□□□□ 0.56
TRIM47Q96LD4 TUBB1P1-201ENST00000503144 1300 ntBASIC18.55■□□□□ 0.56
TRIM47Q96LD4 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM47Q96LD4 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC18.55■□□□□ 0.56
TRIM47Q96LD4 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC18.55■□□□□ 0.56
TRIM47Q96LD4 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC18.55■□□□□ 0.56
TRIM47Q96LD4 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC18.55■□□□□ 0.56
TRIM47Q96LD4 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
TRIM47Q96LD4 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM47Q96LD4 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM47Q96LD4 APOC3-202ENST00000375345 604 ntTSL 5 BASIC18.55■□□□□ 0.56
TRIM47Q96LD4 BRWD1P1-201ENST00000401091 371 ntBASIC18.55■□□□□ 0.56
TRIM47Q96LD4 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM47Q96LD4 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC18.55■□□□□ 0.56
TRIM47Q96LD4 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC18.55■□□□□ 0.56
TRIM47Q96LD4 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC18.55■□□□□ 0.56
TRIM47Q96LD4 AL355994.2-201ENST00000447882 704 ntBASIC18.55■□□□□ 0.56
TRIM47Q96LD4 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC18.55■□□□□ 0.56
TRIM47Q96LD4 AC104596.2-201ENST00000512793 793 ntBASIC18.55■□□□□ 0.56
TRIM47Q96LD4 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC18.55■□□□□ 0.56
TRIM47Q96LD4 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC18.55■□□□□ 0.56
TRIM47Q96LD4 TIMM17BP1-201ENST00000545713 516 ntBASIC18.55■□□□□ 0.56
TRIM47Q96LD4 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC18.55■□□□□ 0.56
TRIM47Q96LD4 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
TRIM47Q96LD4 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC18.55■□□□□ 0.56
TRIM47Q96LD4 AC025048.3-201ENST00000590609 569 ntBASIC18.55■□□□□ 0.56
TRIM47Q96LD4 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
TRIM47Q96LD4 AC244093.1-201ENST00000610837 814 ntBASIC18.55■□□□□ 0.56
TRIM47Q96LD4 AC005702.4-201ENST00000618393 416 ntBASIC18.55■□□□□ 0.56
TRIM47Q96LD4 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM47Q96LD4 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM47Q96LD4 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM47Q96LD4 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM47Q96LD4 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM47Q96LD4 ME2P1-201ENST00000426028 1970 ntBASIC18.55■□□□□ 0.56
TRIM47Q96LD4 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM47Q96LD4 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM47Q96LD4 BANP-204ENST00000393208 2283 ntTSL 2 BASIC18.54■□□□□ 0.56
TRIM47Q96LD4 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM47Q96LD4 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM47Q96LD4 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
TRIM47Q96LD4 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM47Q96LD4 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM47Q96LD4 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM47Q96LD4 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
TRIM47Q96LD4 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
TRIM47Q96LD4 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM47Q96LD4 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.54■□□□□ 0.56
TRIM47Q96LD4 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM47Q96LD4 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.54■□□□□ 0.56
TRIM47Q96LD4 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
TRIM47Q96LD4 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
TRIM47Q96LD4 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
TRIM47Q96LD4 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM47Q96LD4 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM47Q96LD4 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM47Q96LD4 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
TRIM47Q96LD4 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM47Q96LD4 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM47Q96LD4 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM47Q96LD4 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC18.54■□□□□ 0.56
TRIM47Q96LD4 HLA-DPB2-205ENST00000435074 1188 ntBASIC18.54■□□□□ 0.56
TRIM47Q96LD4 IGHV3OR16-16-201ENST00000563644 343 ntBASIC18.54■□□□□ 0.56
TRIM47Q96LD4 AC103810.3-201ENST00000583567 96 ntBASIC18.54■□□□□ 0.56
TRIM47Q96LD4 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC18.54■□□□□ 0.56
TRIM47Q96LD4 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM47Q96LD4 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM47Q96LD4 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC18.54■□□□□ 0.56
TRIM47Q96LD4 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM47Q96LD4 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM47Q96LD4 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM47Q96LD4 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM47Q96LD4 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC18.54■□□□□ 0.56
TRIM47Q96LD4 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms