Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.8■□□□□ 0.12
ECHDC3Q96DC8 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.8■□□□□ 0.12
ECHDC3Q96DC8 TAF8-206ENST00000472818 719 ntTSL 2 BASIC15.8■□□□□ 0.12
ECHDC3Q96DC8 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
ECHDC3Q96DC8 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.8■□□□□ 0.12
ECHDC3Q96DC8 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.8■□□□□ 0.12
ECHDC3Q96DC8 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.8■□□□□ 0.12
ECHDC3Q96DC8 AC140912.1-201ENST00000577171 1054 ntBASIC15.8■□□□□ 0.12
ECHDC3Q96DC8 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.8■□□□□ 0.12
ECHDC3Q96DC8 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.8■□□□□ 0.12
ECHDC3Q96DC8 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC15.8■□□□□ 0.12
ECHDC3Q96DC8 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
ECHDC3Q96DC8 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.8■□□□□ 0.12
ECHDC3Q96DC8 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ECHDC3Q96DC8 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
ECHDC3Q96DC8 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ECHDC3Q96DC8 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.8■□□□□ 0.12
ECHDC3Q96DC8 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ECHDC3Q96DC8 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
ECHDC3Q96DC8 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ECHDC3Q96DC8 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
ECHDC3Q96DC8 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ECHDC3Q96DC8 AL121723.1-201ENST00000445194 1519 ntBASIC15.79■□□□□ 0.12
ECHDC3Q96DC8 CLK3P2-201ENST00000427566 1453 ntBASIC15.79■□□□□ 0.12
ECHDC3Q96DC8 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
ECHDC3Q96DC8 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ECHDC3Q96DC8 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ECHDC3Q96DC8 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ECHDC3Q96DC8 AL133267.1-201ENST00000398220 340 ntBASIC15.79■□□□□ 0.12
ECHDC3Q96DC8 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
ECHDC3Q96DC8 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.79■□□□□ 0.12
ECHDC3Q96DC8 KRT18P43-201ENST00000469825 1281 ntBASIC15.79■□□□□ 0.12
ECHDC3Q96DC8 RN7SL399P-201ENST00000471648 279 ntBASIC15.79■□□□□ 0.12
ECHDC3Q96DC8 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.79■□□□□ 0.12
ECHDC3Q96DC8 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
ECHDC3Q96DC8 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC15.79■□□□□ 0.12
ECHDC3Q96DC8 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC15.79■□□□□ 0.12
ECHDC3Q96DC8 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.79■□□□□ 0.12
ECHDC3Q96DC8 AC093726.1-201ENST00000608064 963 ntBASIC15.79■□□□□ 0.12
ECHDC3Q96DC8 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
ECHDC3Q96DC8 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ECHDC3Q96DC8 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
ECHDC3Q96DC8 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ECHDC3Q96DC8 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ECHDC3Q96DC8 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.79■□□□□ 0.12
ECHDC3Q96DC8 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ECHDC3Q96DC8 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ECHDC3Q96DC8 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.79■□□□□ 0.12
ECHDC3Q96DC8 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.79■□□□□ 0.12
ECHDC3Q96DC8 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
ECHDC3Q96DC8 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.79■□□□□ 0.12
ECHDC3Q96DC8 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ECHDC3Q96DC8 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ECHDC3Q96DC8 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.79■□□□□ 0.12
ECHDC3Q96DC8 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ECHDC3Q96DC8 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ECHDC3Q96DC8 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
ECHDC3Q96DC8 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ECHDC3Q96DC8 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ECHDC3Q96DC8 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
ECHDC3Q96DC8 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.78■□□□□ 0.12
ECHDC3Q96DC8 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
ECHDC3Q96DC8 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
ECHDC3Q96DC8 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ECHDC3Q96DC8 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
ECHDC3Q96DC8 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.78■□□□□ 0.12
ECHDC3Q96DC8 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.78■□□□□ 0.12
ECHDC3Q96DC8 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.78■□□□□ 0.12
ECHDC3Q96DC8 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.78■□□□□ 0.12
ECHDC3Q96DC8 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
ECHDC3Q96DC8 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.78■□□□□ 0.12
ECHDC3Q96DC8 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ECHDC3Q96DC8 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
ECHDC3Q96DC8 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.78■□□□□ 0.12
ECHDC3Q96DC8 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ECHDC3Q96DC8 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ECHDC3Q96DC8 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
ECHDC3Q96DC8 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.78■□□□□ 0.12
ECHDC3Q96DC8 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15.78■□□□□ 0.12
ECHDC3Q96DC8 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ECHDC3Q96DC8 AC036164.1-201ENST00000570544 333 ntBASIC15.78■□□□□ 0.12
ECHDC3Q96DC8 AC015910.1-201ENST00000579400 975 ntBASIC15.78■□□□□ 0.12
ECHDC3Q96DC8 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.78■□□□□ 0.12
ECHDC3Q96DC8 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ECHDC3Q96DC8 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ECHDC3Q96DC8 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ECHDC3Q96DC8 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ECHDC3Q96DC8 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
ECHDC3Q96DC8 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ECHDC3Q96DC8 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ECHDC3Q96DC8 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.78■□□□□ 0.12
ECHDC3Q96DC8 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.77■□□□□ 0.12
ECHDC3Q96DC8 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ECHDC3Q96DC8 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.77■□□□□ 0.12
ECHDC3Q96DC8 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
ECHDC3Q96DC8 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
ECHDC3Q96DC8 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
ECHDC3Q96DC8 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
ECHDC3Q96DC8 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
ECHDC3Q96DC8 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms