Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
SH3KBP1Q96B97 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SH3KBP1Q96B97 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.79■□□□□ 0.12
SH3KBP1Q96B97 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SH3KBP1Q96B97 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SH3KBP1Q96B97 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SH3KBP1Q96B97 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SH3KBP1Q96B97 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
SH3KBP1Q96B97 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
SH3KBP1Q96B97 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SH3KBP1Q96B97 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
SH3KBP1Q96B97 AC087499.5-201ENST00000452760 1342 ntBASIC15.79■□□□□ 0.12
SH3KBP1Q96B97 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SH3KBP1Q96B97 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.79■□□□□ 0.12
SH3KBP1Q96B97 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SH3KBP1Q96B97 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SH3KBP1Q96B97 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SH3KBP1Q96B97 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC15.79■□□□□ 0.12
SH3KBP1Q96B97 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.79■□□□□ 0.12
SH3KBP1Q96B97 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
SH3KBP1Q96B97 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
SH3KBP1Q96B97 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.79■□□□□ 0.12
SH3KBP1Q96B97 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SH3KBP1Q96B97 AC009118.2-201ENST00000613275 655 ntBASIC15.79■□□□□ 0.12
SH3KBP1Q96B97 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
SH3KBP1Q96B97 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SH3KBP1Q96B97 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
SH3KBP1Q96B97 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.79■□□□□ 0.12
SH3KBP1Q96B97 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
SH3KBP1Q96B97 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SH3KBP1Q96B97 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SH3KBP1Q96B97 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SH3KBP1Q96B97 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SH3KBP1Q96B97 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SH3KBP1Q96B97 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
SH3KBP1Q96B97 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.78■□□□□ 0.12
SH3KBP1Q96B97 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
SH3KBP1Q96B97 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SH3KBP1Q96B97 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.78■□□□□ 0.12
SH3KBP1Q96B97 PAUPAR-201ENST00000630360 2965 ntBASIC15.78■□□□□ 0.12
SH3KBP1Q96B97 AL596087.1-201ENST00000400979 1969 ntBASIC15.78■□□□□ 0.12
SH3KBP1Q96B97 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
SH3KBP1Q96B97 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
SH3KBP1Q96B97 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SH3KBP1Q96B97 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
SH3KBP1Q96B97 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SH3KBP1Q96B97 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.78■□□□□ 0.12
SH3KBP1Q96B97 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SH3KBP1Q96B97 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.78■□□□□ 0.12
SH3KBP1Q96B97 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SH3KBP1Q96B97 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SH3KBP1Q96B97 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
SH3KBP1Q96B97 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
SH3KBP1Q96B97 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
SH3KBP1Q96B97 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.78■□□□□ 0.12
SH3KBP1Q96B97 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SH3KBP1Q96B97 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SH3KBP1Q96B97 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SH3KBP1Q96B97 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.78■□□□□ 0.12
SH3KBP1Q96B97 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SH3KBP1Q96B97 AC002472.2-201ENST00000442739 958 ntBASIC15.78■□□□□ 0.12
SH3KBP1Q96B97 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.78■□□□□ 0.12
SH3KBP1Q96B97 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.78■□□□□ 0.12
SH3KBP1Q96B97 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.78■□□□□ 0.12
SH3KBP1Q96B97 AC190387.1-201ENST00000551683 408 ntBASIC15.78■□□□□ 0.12
SH3KBP1Q96B97 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.78■□□□□ 0.12
SH3KBP1Q96B97 AL079307.3-201ENST00000556114 283 ntBASIC15.78■□□□□ 0.12
SH3KBP1Q96B97 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.78■□□□□ 0.12
SH3KBP1Q96B97 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.78■□□□□ 0.12
SH3KBP1Q96B97 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
SH3KBP1Q96B97 HFE2-206ENST00000634927 506 ntTSL 4 BASIC15.78■□□□□ 0.12
SH3KBP1Q96B97 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.78■□□□□ 0.12
SH3KBP1Q96B97 AC022188.1-201ENST00000620960 1664 ntBASIC15.78■□□□□ 0.12
SH3KBP1Q96B97 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.78■□□□□ 0.12
SH3KBP1Q96B97 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.78■□□□□ 0.12
SH3KBP1Q96B97 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SH3KBP1Q96B97 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SH3KBP1Q96B97 AC022144.1-201ENST00000602255 1580 ntBASIC15.78■□□□□ 0.12
SH3KBP1Q96B97 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SH3KBP1Q96B97 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SH3KBP1Q96B97 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
SH3KBP1Q96B97 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SH3KBP1Q96B97 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SH3KBP1Q96B97 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SH3KBP1Q96B97 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.78■□□□□ 0.12
SH3KBP1Q96B97 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SH3KBP1Q96B97 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SH3KBP1Q96B97 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.77■□□□□ 0.12
SH3KBP1Q96B97 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
SH3KBP1Q96B97 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.77■□□□□ 0.12
SH3KBP1Q96B97 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.77■□□□□ 0.12
SH3KBP1Q96B97 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
SH3KBP1Q96B97 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.77■□□□□ 0.12
SH3KBP1Q96B97 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SH3KBP1Q96B97 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SH3KBP1Q96B97 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SH3KBP1Q96B97 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SH3KBP1Q96B97 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
SH3KBP1Q96B97 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SH3KBP1Q96B97 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms