Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CASKIN1Q8WXD9 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CASKIN1Q8WXD9 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CASKIN1Q8WXD9 LSM5-207ENST00000410044 687 ntTSL 3 BASIC24.18■■□□□ 1.46
CASKIN1Q8WXD9 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC24.18■■□□□ 1.46
CASKIN1Q8WXD9 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC24.18■■□□□ 1.46
CASKIN1Q8WXD9 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC24.18■■□□□ 1.46
CASKIN1Q8WXD9 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC24.18■■□□□ 1.46
CASKIN1Q8WXD9 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC24.18■■□□□ 1.46
CASKIN1Q8WXD9 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CASKIN1Q8WXD9 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CASKIN1Q8WXD9 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC24.18■■□□□ 1.46
CASKIN1Q8WXD9 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
CASKIN1Q8WXD9 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC24.17■■□□□ 1.46
CASKIN1Q8WXD9 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
CASKIN1Q8WXD9 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CASKIN1Q8WXD9 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CASKIN1Q8WXD9 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
CASKIN1Q8WXD9 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CASKIN1Q8WXD9 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
CASKIN1Q8WXD9 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
CASKIN1Q8WXD9 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CASKIN1Q8WXD9 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
CASKIN1Q8WXD9 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
CASKIN1Q8WXD9 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC24.17■■□□□ 1.46
CASKIN1Q8WXD9 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC24.17■■□□□ 1.46
CASKIN1Q8WXD9 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC24.17■■□□□ 1.46
CASKIN1Q8WXD9 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC24.17■■□□□ 1.46
CASKIN1Q8WXD9 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC24.17■■□□□ 1.46
CASKIN1Q8WXD9 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC24.17■■□□□ 1.46
CASKIN1Q8WXD9 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CASKIN1Q8WXD9 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC24.16■■□□□ 1.46
CASKIN1Q8WXD9 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CASKIN1Q8WXD9 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
CASKIN1Q8WXD9 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC24.16■■□□□ 1.46
CASKIN1Q8WXD9 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC24.16■■□□□ 1.46
CASKIN1Q8WXD9 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC24.16■■□□□ 1.46
CASKIN1Q8WXD9 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CASKIN1Q8WXD9 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CASKIN1Q8WXD9 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
CASKIN1Q8WXD9 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CASKIN1Q8WXD9 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CASKIN1Q8WXD9 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CASKIN1Q8WXD9 AL591846.1-201ENST00000451736 433 ntBASIC24.16■■□□□ 1.46
CASKIN1Q8WXD9 AC004066.1-201ENST00000502488 802 ntBASIC24.16■■□□□ 1.46
CASKIN1Q8WXD9 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CASKIN1Q8WXD9 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC24.16■■□□□ 1.46
CASKIN1Q8WXD9 ACR-203ENST00000529621 708 ntTSL 5 BASIC24.16■■□□□ 1.46
CASKIN1Q8WXD9 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CASKIN1Q8WXD9 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC24.16■■□□□ 1.46
CASKIN1Q8WXD9 SAMD11P1-201ENST00000571429 661 ntBASIC24.16■■□□□ 1.46
CASKIN1Q8WXD9 MIR4741-201ENST00000579822 90 ntBASIC24.16■■□□□ 1.46
CASKIN1Q8WXD9 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC24.16■■□□□ 1.46
CASKIN1Q8WXD9 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC24.16■■□□□ 1.46
CASKIN1Q8WXD9 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
CASKIN1Q8WXD9 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CASKIN1Q8WXD9 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC24.15■■□□□ 1.46
CASKIN1Q8WXD9 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC24.15■■□□□ 1.46
CASKIN1Q8WXD9 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CASKIN1Q8WXD9 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CASKIN1Q8WXD9 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CASKIN1Q8WXD9 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CASKIN1Q8WXD9 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CASKIN1Q8WXD9 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC24.15■■□□□ 1.46
CASKIN1Q8WXD9 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CASKIN1Q8WXD9 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
CASKIN1Q8WXD9 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC24.15■■□□□ 1.46
CASKIN1Q8WXD9 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CASKIN1Q8WXD9 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC24.15■■□□□ 1.46
CASKIN1Q8WXD9 GPAA1P2-201ENST00000417923 928 ntBASIC24.15■■□□□ 1.46
CASKIN1Q8WXD9 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC24.15■■□□□ 1.46
CASKIN1Q8WXD9 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC24.15■■□□□ 1.46
CASKIN1Q8WXD9 MTX1P1-201ENST00000440904 838 ntBASIC24.15■■□□□ 1.46
CASKIN1Q8WXD9 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CASKIN1Q8WXD9 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC24.15■■□□□ 1.46
CASKIN1Q8WXD9 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC24.15■■□□□ 1.46
CASKIN1Q8WXD9 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC24.15■■□□□ 1.46
CASKIN1Q8WXD9 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC24.15■■□□□ 1.46
CASKIN1Q8WXD9 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC24.15■■□□□ 1.46
CASKIN1Q8WXD9 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
CASKIN1Q8WXD9 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
CASKIN1Q8WXD9 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
CASKIN1Q8WXD9 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
CASKIN1Q8WXD9 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.46
CASKIN1Q8WXD9 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
CASKIN1Q8WXD9 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC24.14■■□□□ 1.46
CASKIN1Q8WXD9 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC24.14■■□□□ 1.46
CASKIN1Q8WXD9 WT1-209ENST00000530998 2421 ntTSL 2 BASIC24.14■■□□□ 1.46
CASKIN1Q8WXD9 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC24.14■■□□□ 1.46
CASKIN1Q8WXD9 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
CASKIN1Q8WXD9 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
CASKIN1Q8WXD9 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
CASKIN1Q8WXD9 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
CASKIN1Q8WXD9 POM121L8P-201ENST00000417732 1281 ntBASIC24.14■■□□□ 1.45
CASKIN1Q8WXD9 HLA-K-203ENST00000430151 1046 ntBASIC24.14■■□□□ 1.45
CASKIN1Q8WXD9 POM121L9P-203ENST00000441984 1285 ntBASIC24.14■■□□□ 1.45
CASKIN1Q8WXD9 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC24.14■■□□□ 1.45
CASKIN1Q8WXD9 RPSAP36-202ENST00000494591 1261 ntBASIC24.14■■□□□ 1.45
CASKIN1Q8WXD9 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC24.14■■□□□ 1.45
CASKIN1Q8WXD9 ENPP7P14-201ENST00000621765 1040 ntBASIC24.14■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms