Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SCG3Q8WXD2 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.37■□□□□ 0.21
SCG3Q8WXD2 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.37■□□□□ 0.21
SCG3Q8WXD2 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.37■□□□□ 0.21
SCG3Q8WXD2 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
SCG3Q8WXD2 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.37■□□□□ 0.21
SCG3Q8WXD2 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC16.37■□□□□ 0.21
SCG3Q8WXD2 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SCG3Q8WXD2 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.37■□□□□ 0.21
SCG3Q8WXD2 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SCG3Q8WXD2 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.37■□□□□ 0.21
SCG3Q8WXD2 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SCG3Q8WXD2 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SCG3Q8WXD2 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SCG3Q8WXD2 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
SCG3Q8WXD2 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SCG3Q8WXD2 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SCG3Q8WXD2 AC013268.4-201ENST00000637413 2228 ntBASIC16.36■□□□□ 0.21
SCG3Q8WXD2 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SCG3Q8WXD2 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.36■□□□□ 0.21
SCG3Q8WXD2 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SCG3Q8WXD2 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.36■□□□□ 0.21
SCG3Q8WXD2 AC093724.1-201ENST00000448659 1027 ntBASIC16.36■□□□□ 0.21
SCG3Q8WXD2 AC245100.5-201ENST00000452108 331 ntBASIC16.36■□□□□ 0.21
SCG3Q8WXD2 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.36■□□□□ 0.21
SCG3Q8WXD2 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.36■□□□□ 0.21
SCG3Q8WXD2 SPCS2P1-201ENST00000561636 679 ntBASIC16.36■□□□□ 0.21
SCG3Q8WXD2 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.36■□□□□ 0.21
SCG3Q8WXD2 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.36■□□□□ 0.21
SCG3Q8WXD2 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.36■□□□□ 0.21
SCG3Q8WXD2 AL096865.1-201ENST00000606796 927 ntBASIC16.36■□□□□ 0.21
SCG3Q8WXD2 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
SCG3Q8WXD2 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.36■□□□□ 0.21
SCG3Q8WXD2 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
SCG3Q8WXD2 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SCG3Q8WXD2 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
SCG3Q8WXD2 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SCG3Q8WXD2 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SCG3Q8WXD2 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.36■□□□□ 0.21
SCG3Q8WXD2 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SCG3Q8WXD2 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SCG3Q8WXD2 AL603832.2-201ENST00000566195 2125 ntBASIC16.36■□□□□ 0.21
SCG3Q8WXD2 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SCG3Q8WXD2 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SCG3Q8WXD2 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.36■□□□□ 0.21
SCG3Q8WXD2 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SCG3Q8WXD2 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
SCG3Q8WXD2 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SCG3Q8WXD2 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
SCG3Q8WXD2 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SCG3Q8WXD2 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SCG3Q8WXD2 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SCG3Q8WXD2 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SCG3Q8WXD2 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SCG3Q8WXD2 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC16.35■□□□□ 0.21
SCG3Q8WXD2 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
SCG3Q8WXD2 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.35■□□□□ 0.21
SCG3Q8WXD2 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
SCG3Q8WXD2 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SCG3Q8WXD2 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
SCG3Q8WXD2 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
SCG3Q8WXD2 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
SCG3Q8WXD2 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SCG3Q8WXD2 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SCG3Q8WXD2 FAM58DP-201ENST00000428076 619 ntBASIC16.35■□□□□ 0.21
SCG3Q8WXD2 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.35■□□□□ 0.21
SCG3Q8WXD2 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.35■□□□□ 0.21
SCG3Q8WXD2 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.35■□□□□ 0.21
SCG3Q8WXD2 AC069262.1-201ENST00000539058 672 ntBASIC16.35■□□□□ 0.21
SCG3Q8WXD2 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.35■□□□□ 0.21
SCG3Q8WXD2 AL365330.1-201ENST00000607459 531 ntBASIC16.35■□□□□ 0.21
SCG3Q8WXD2 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.35■□□□□ 0.21
SCG3Q8WXD2 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SCG3Q8WXD2 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
SCG3Q8WXD2 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.35■□□□□ 0.21
SCG3Q8WXD2 TUBB3P1-201ENST00000405796 1332 ntBASIC16.35■□□□□ 0.21
SCG3Q8WXD2 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
SCG3Q8WXD2 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SCG3Q8WXD2 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
SCG3Q8WXD2 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SCG3Q8WXD2 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
SCG3Q8WXD2 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
SCG3Q8WXD2 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SCG3Q8WXD2 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SCG3Q8WXD2 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC16.34■□□□□ 0.21
SCG3Q8WXD2 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC16.34■□□□□ 0.21
SCG3Q8WXD2 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SCG3Q8WXD2 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SCG3Q8WXD2 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SCG3Q8WXD2 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SCG3Q8WXD2 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.34■□□□□ 0.21
SCG3Q8WXD2 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.34■□□□□ 0.21
SCG3Q8WXD2 LINC01225-203ENST00000563550 1244 ntBASIC16.34■□□□□ 0.21
SCG3Q8WXD2 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.34■□□□□ 0.21
SCG3Q8WXD2 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.34■□□□□ 0.21
SCG3Q8WXD2 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SCG3Q8WXD2 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SCG3Q8WXD2 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SCG3Q8WXD2 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.34■□□□□ 0.21
SCG3Q8WXD2 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms