Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HIPK4Q8NE63 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
HIPK4Q8NE63 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HIPK4Q8NE63 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
HIPK4Q8NE63 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
HIPK4Q8NE63 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
HIPK4Q8NE63 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
HIPK4Q8NE63 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HIPK4Q8NE63 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.52■□□□□ 0.07
HIPK4Q8NE63 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HIPK4Q8NE63 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
HIPK4Q8NE63 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HIPK4Q8NE63 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
HIPK4Q8NE63 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
HIPK4Q8NE63 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.52■□□□□ 0.07
HIPK4Q8NE63 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HIPK4Q8NE63 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
HIPK4Q8NE63 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HIPK4Q8NE63 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
HIPK4Q8NE63 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.51■□□□□ 0.07
HIPK4Q8NE63 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
HIPK4Q8NE63 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HIPK4Q8NE63 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HIPK4Q8NE63 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HIPK4Q8NE63 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HIPK4Q8NE63 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.51■□□□□ 0.07
HIPK4Q8NE63 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.51■□□□□ 0.07
HIPK4Q8NE63 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.51■□□□□ 0.07
HIPK4Q8NE63 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HIPK4Q8NE63 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.51■□□□□ 0.07
HIPK4Q8NE63 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HIPK4Q8NE63 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
HIPK4Q8NE63 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
HIPK4Q8NE63 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HIPK4Q8NE63 LINC01101-201ENST00000622953 1884 ntBASIC15.51■□□□□ 0.07
HIPK4Q8NE63 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HIPK4Q8NE63 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.51■□□□□ 0.07
HIPK4Q8NE63 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.51■□□□□ 0.07
HIPK4Q8NE63 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HIPK4Q8NE63 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
HIPK4Q8NE63 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HIPK4Q8NE63 DFFB-203ENST00000341385 572 ntTSL 5 BASIC15.51■□□□□ 0.07
HIPK4Q8NE63 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.51■□□□□ 0.07
HIPK4Q8NE63 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.51■□□□□ 0.07
HIPK4Q8NE63 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
HIPK4Q8NE63 TSPY19P-201ENST00000418461 509 ntBASIC15.51■□□□□ 0.07
HIPK4Q8NE63 TSPY18P-201ENST00000441642 509 ntBASIC15.51■□□□□ 0.07
HIPK4Q8NE63 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HIPK4Q8NE63 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC15.51■□□□□ 0.07
HIPK4Q8NE63 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HIPK4Q8NE63 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HIPK4Q8NE63 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC15.51■□□□□ 0.07
HIPK4Q8NE63 AC107918.2-201ENST00000530817 355 ntBASIC15.51■□□□□ 0.07
HIPK4Q8NE63 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HIPK4Q8NE63 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.51■□□□□ 0.07
HIPK4Q8NE63 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.51■□□□□ 0.07
HIPK4Q8NE63 AC091304.2-201ENST00000564639 760 ntBASIC15.51■□□□□ 0.07
HIPK4Q8NE63 AC005412.3-201ENST00000580309 715 ntBASIC15.51■□□□□ 0.07
HIPK4Q8NE63 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HIPK4Q8NE63 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.51■□□□□ 0.07
HIPK4Q8NE63 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.51■□□□□ 0.07
HIPK4Q8NE63 GGTLC5P-201ENST00000617623 998 ntBASIC15.51■□□□□ 0.07
HIPK4Q8NE63 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.51■□□□□ 0.07
HIPK4Q8NE63 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.51■□□□□ 0.07
HIPK4Q8NE63 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.51■□□□□ 0.07
HIPK4Q8NE63 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.51■□□□□ 0.07
HIPK4Q8NE63 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HIPK4Q8NE63 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.51■□□□□ 0.07
HIPK4Q8NE63 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HIPK4Q8NE63 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HIPK4Q8NE63 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.51■□□□□ 0.07
HIPK4Q8NE63 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HIPK4Q8NE63 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
HIPK4Q8NE63 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
HIPK4Q8NE63 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
HIPK4Q8NE63 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HIPK4Q8NE63 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HIPK4Q8NE63 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HIPK4Q8NE63 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HIPK4Q8NE63 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HIPK4Q8NE63 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HIPK4Q8NE63 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
HIPK4Q8NE63 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HIPK4Q8NE63 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HIPK4Q8NE63 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HIPK4Q8NE63 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HIPK4Q8NE63 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HIPK4Q8NE63 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HIPK4Q8NE63 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
HIPK4Q8NE63 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.5■□□□□ 0.07
HIPK4Q8NE63 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC15.5■□□□□ 0.07
HIPK4Q8NE63 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HIPK4Q8NE63 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HIPK4Q8NE63 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HIPK4Q8NE63 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HIPK4Q8NE63 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HIPK4Q8NE63 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HIPK4Q8NE63 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HIPK4Q8NE63 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HIPK4Q8NE63 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms