Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC13.31□□□□□ -0.28
C11orf42Q8N5U0 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
C11orf42Q8N5U0 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
C11orf42Q8N5U0 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
C11orf42Q8N5U0 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
C11orf42Q8N5U0 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
C11orf42Q8N5U0 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC13.31□□□□□ -0.28
C11orf42Q8N5U0 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
C11orf42Q8N5U0 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
C11orf42Q8N5U0 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
C11orf42Q8N5U0 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
C11orf42Q8N5U0 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC13.31□□□□□ -0.28
C11orf42Q8N5U0 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
C11orf42Q8N5U0 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
C11orf42Q8N5U0 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
C11orf42Q8N5U0 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.31□□□□□ -0.28
C11orf42Q8N5U0 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
C11orf42Q8N5U0 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
C11orf42Q8N5U0 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
C11orf42Q8N5U0 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
C11orf42Q8N5U0 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
C11orf42Q8N5U0 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
C11orf42Q8N5U0 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.3□□□□□ -0.28
C11orf42Q8N5U0 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.3□□□□□ -0.28
C11orf42Q8N5U0 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC13.3□□□□□ -0.28
C11orf42Q8N5U0 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
C11orf42Q8N5U0 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
C11orf42Q8N5U0 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
C11orf42Q8N5U0 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
C11orf42Q8N5U0 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
C11orf42Q8N5U0 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
C11orf42Q8N5U0 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
C11orf42Q8N5U0 SP100-205ENST00000409824 1802 ntTSL 5 BASIC13.3□□□□□ -0.28
C11orf42Q8N5U0 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC13.3□□□□□ -0.28
C11orf42Q8N5U0 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
C11orf42Q8N5U0 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
C11orf42Q8N5U0 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
C11orf42Q8N5U0 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
C11orf42Q8N5U0 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
C11orf42Q8N5U0 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.3□□□□□ -0.28
C11orf42Q8N5U0 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
C11orf42Q8N5U0 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
C11orf42Q8N5U0 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
C11orf42Q8N5U0 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
C11orf42Q8N5U0 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
C11orf42Q8N5U0 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
C11orf42Q8N5U0 PON3-203ENST00000427422 894 ntTSL 3 BASIC13.3□□□□□ -0.28
C11orf42Q8N5U0 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
C11orf42Q8N5U0 AC245100.5-201ENST00000452108 331 ntBASIC13.3□□□□□ -0.28
C11orf42Q8N5U0 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC13.3□□□□□ -0.28
C11orf42Q8N5U0 VPS29-207ENST00000549970 818 ntTSL 3 BASIC13.3□□□□□ -0.28
C11orf42Q8N5U0 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC13.3□□□□□ -0.28
C11orf42Q8N5U0 AC004449.1-201ENST00000564240 433 ntBASIC13.3□□□□□ -0.28
C11orf42Q8N5U0 MIR4453-201ENST00000584019 89 ntBASIC13.3□□□□□ -0.28
C11orf42Q8N5U0 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC13.3□□□□□ -0.28
C11orf42Q8N5U0 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
C11orf42Q8N5U0 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC13.3□□□□□ -0.28
C11orf42Q8N5U0 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
C11orf42Q8N5U0 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC13.3□□□□□ -0.28
C11orf42Q8N5U0 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
C11orf42Q8N5U0 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC13.3□□□□□ -0.28
C11orf42Q8N5U0 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
C11orf42Q8N5U0 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC13.3□□□□□ -0.28
C11orf42Q8N5U0 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
C11orf42Q8N5U0 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
C11orf42Q8N5U0 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
C11orf42Q8N5U0 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
C11orf42Q8N5U0 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
C11orf42Q8N5U0 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
C11orf42Q8N5U0 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
C11orf42Q8N5U0 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
C11orf42Q8N5U0 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
C11orf42Q8N5U0 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
C11orf42Q8N5U0 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
C11orf42Q8N5U0 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
C11orf42Q8N5U0 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
C11orf42Q8N5U0 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC13.29□□□□□ -0.28
C11orf42Q8N5U0 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC13.29□□□□□ -0.28
C11orf42Q8N5U0 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
C11orf42Q8N5U0 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
C11orf42Q8N5U0 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
C11orf42Q8N5U0 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
C11orf42Q8N5U0 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC13.29□□□□□ -0.28
C11orf42Q8N5U0 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC13.29□□□□□ -0.28
C11orf42Q8N5U0 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.29□□□□□ -0.28
C11orf42Q8N5U0 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
C11orf42Q8N5U0 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
C11orf42Q8N5U0 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC13.29□□□□□ -0.28
C11orf42Q8N5U0 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC13.29□□□□□ -0.28
C11orf42Q8N5U0 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
C11orf42Q8N5U0 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
C11orf42Q8N5U0 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
C11orf42Q8N5U0 HNRNPFP1-201ENST00000391730 1133 ntBASIC13.29□□□□□ -0.28
C11orf42Q8N5U0 SPDYE7P-202ENST00000420373 878 ntBASIC13.29□□□□□ -0.28
C11orf42Q8N5U0 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.29□□□□□ -0.28
C11orf42Q8N5U0 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC13.29□□□□□ -0.28
C11orf42Q8N5U0 CCDC74BP1-201ENST00000508880 1123 ntBASIC13.29□□□□□ -0.28
C11orf42Q8N5U0 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.29□□□□□ -0.28
C11orf42Q8N5U0 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC13.29□□□□□ -0.28
C11orf42Q8N5U0 COQ4-205ENST00000609948 956 ntTSL 2 BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms