Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
XRN1Q8IZH2 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
XRN1Q8IZH2 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
XRN1Q8IZH2 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
XRN1Q8IZH2 PFN2-205ENST00000461868 613 ntTSL 2 BASIC21.46■■□□□ 1.03
XRN1Q8IZH2 AC005740.2-201ENST00000511085 419 ntBASIC21.46■■□□□ 1.03
XRN1Q8IZH2 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC21.46■■□□□ 1.03
XRN1Q8IZH2 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC21.46■■□□□ 1.03
XRN1Q8IZH2 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC21.46■■□□□ 1.03
XRN1Q8IZH2 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC21.46■■□□□ 1.03
XRN1Q8IZH2 AL023803.2-201ENST00000620080 638 ntBASIC21.46■■□□□ 1.03
XRN1Q8IZH2 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC21.46■■□□□ 1.03
XRN1Q8IZH2 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC21.46■■□□□ 1.03
XRN1Q8IZH2 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
XRN1Q8IZH2 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
XRN1Q8IZH2 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
XRN1Q8IZH2 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
XRN1Q8IZH2 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.46■■□□□ 1.03
XRN1Q8IZH2 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
XRN1Q8IZH2 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
XRN1Q8IZH2 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
XRN1Q8IZH2 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
XRN1Q8IZH2 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
XRN1Q8IZH2 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
XRN1Q8IZH2 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
XRN1Q8IZH2 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC21.46■■□□□ 1.03
XRN1Q8IZH2 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
XRN1Q8IZH2 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC21.46■■□□□ 1.03
XRN1Q8IZH2 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC21.46■■□□□ 1.03
XRN1Q8IZH2 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
XRN1Q8IZH2 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
XRN1Q8IZH2 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
XRN1Q8IZH2 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.03
XRN1Q8IZH2 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
XRN1Q8IZH2 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
XRN1Q8IZH2 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
XRN1Q8IZH2 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
XRN1Q8IZH2 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
XRN1Q8IZH2 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
XRN1Q8IZH2 KRT8P29-201ENST00000420409 1371 ntBASIC21.45■■□□□ 1.02
XRN1Q8IZH2 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
XRN1Q8IZH2 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
XRN1Q8IZH2 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
XRN1Q8IZH2 NPPA-201ENST00000376476 728 ntTSL 3 BASIC21.45■■□□□ 1.02
XRN1Q8IZH2 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC21.45■■□□□ 1.02
XRN1Q8IZH2 AC011742.3-201ENST00000439053 820 ntBASIC21.45■■□□□ 1.02
XRN1Q8IZH2 RNMTL1P1-201ENST00000454103 560 ntBASIC21.45■■□□□ 1.02
XRN1Q8IZH2 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC21.45■■□□□ 1.02
XRN1Q8IZH2 SAMD11P1-201ENST00000571429 661 ntBASIC21.45■■□□□ 1.02
XRN1Q8IZH2 MIR7845-201ENST00000618396 99 ntBASIC21.45■■□□□ 1.02
XRN1Q8IZH2 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
XRN1Q8IZH2 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC21.45■■□□□ 1.02
XRN1Q8IZH2 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
XRN1Q8IZH2 EML3-212ENST00000494176 2901 ntTSL 2 BASIC21.45■■□□□ 1.02
XRN1Q8IZH2 EML3-216ENST00000529309 2909 ntTSL 2 BASIC21.45■■□□□ 1.02
XRN1Q8IZH2 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC21.45■■□□□ 1.02
XRN1Q8IZH2 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC21.45■■□□□ 1.02
XRN1Q8IZH2 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
XRN1Q8IZH2 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
XRN1Q8IZH2 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC21.44■■□□□ 1.02
XRN1Q8IZH2 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
XRN1Q8IZH2 AC124067.4-201ENST00000519691 2379 ntBASIC21.44■■□□□ 1.02
XRN1Q8IZH2 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
XRN1Q8IZH2 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
XRN1Q8IZH2 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
XRN1Q8IZH2 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
XRN1Q8IZH2 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC21.44■■□□□ 1.02
XRN1Q8IZH2 AC104784.1-201ENST00000473096 294 ntBASIC21.44■■□□□ 1.02
XRN1Q8IZH2 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC21.44■■□□□ 1.02
XRN1Q8IZH2 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
XRN1Q8IZH2 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
XRN1Q8IZH2 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
XRN1Q8IZH2 DUX4L47-201ENST00000566374 394 ntBASIC21.44■■□□□ 1.02
XRN1Q8IZH2 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC21.44■■□□□ 1.02
XRN1Q8IZH2 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
XRN1Q8IZH2 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
XRN1Q8IZH2 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
XRN1Q8IZH2 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
XRN1Q8IZH2 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC21.44■■□□□ 1.02
XRN1Q8IZH2 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
XRN1Q8IZH2 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC21.44■■□□□ 1.02
XRN1Q8IZH2 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
XRN1Q8IZH2 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
XRN1Q8IZH2 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC21.43■■□□□ 1.02
XRN1Q8IZH2 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC21.43■■□□□ 1.02
XRN1Q8IZH2 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC21.43■■□□□ 1.02
XRN1Q8IZH2 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
XRN1Q8IZH2 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
XRN1Q8IZH2 AC125604.1-201ENST00000496255 707 ntBASIC21.43■■□□□ 1.02
XRN1Q8IZH2 NPM1P43-201ENST00000558669 786 ntBASIC21.43■■□□□ 1.02
XRN1Q8IZH2 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC21.43■■□□□ 1.02
XRN1Q8IZH2 AC005324.6-201ENST00000587972 613 ntBASIC21.43■■□□□ 1.02
XRN1Q8IZH2 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
XRN1Q8IZH2 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC21.43■■□□□ 1.02
XRN1Q8IZH2 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC21.43■■□□□ 1.02
XRN1Q8IZH2 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
XRN1Q8IZH2 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
XRN1Q8IZH2 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
XRN1Q8IZH2 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
XRN1Q8IZH2 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms