Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM48Q8IWZ4 AC004987.2-201ENST00000395959 1148 ntBASIC15.64■□□□□ 0.09
TRIM48Q8IWZ4 HAUS4P1-201ENST00000406739 1145 ntBASIC15.64■□□□□ 0.09
TRIM48Q8IWZ4 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM48Q8IWZ4 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.64■□□□□ 0.09
TRIM48Q8IWZ4 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.64■□□□□ 0.09
TRIM48Q8IWZ4 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.64■□□□□ 0.09
TRIM48Q8IWZ4 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.64■□□□□ 0.09
TRIM48Q8IWZ4 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM48Q8IWZ4 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM48Q8IWZ4 AL512361.1-201ENST00000554200 418 ntBASIC15.64■□□□□ 0.09
TRIM48Q8IWZ4 AC010336.2-201ENST00000564226 506 ntBASIC15.64■□□□□ 0.09
TRIM48Q8IWZ4 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.64■□□□□ 0.09
TRIM48Q8IWZ4 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM48Q8IWZ4 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM48Q8IWZ4 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM48Q8IWZ4 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.64■□□□□ 0.09
TRIM48Q8IWZ4 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM48Q8IWZ4 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.64■□□□□ 0.09
TRIM48Q8IWZ4 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM48Q8IWZ4 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
TRIM48Q8IWZ4 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.64■□□□□ 0.09
TRIM48Q8IWZ4 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.64■□□□□ 0.09
TRIM48Q8IWZ4 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM48Q8IWZ4 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.64■□□□□ 0.09
TRIM48Q8IWZ4 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.64■□□□□ 0.09
TRIM48Q8IWZ4 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
TRIM48Q8IWZ4 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
TRIM48Q8IWZ4 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM48Q8IWZ4 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.64■□□□□ 0.09
TRIM48Q8IWZ4 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM48Q8IWZ4 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM48Q8IWZ4 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM48Q8IWZ4 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM48Q8IWZ4 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM48Q8IWZ4 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM48Q8IWZ4 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.63■□□□□ 0.09
TRIM48Q8IWZ4 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM48Q8IWZ4 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM48Q8IWZ4 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
TRIM48Q8IWZ4 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM48Q8IWZ4 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM48Q8IWZ4 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM48Q8IWZ4 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
TRIM48Q8IWZ4 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM48Q8IWZ4 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM48Q8IWZ4 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM48Q8IWZ4 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM48Q8IWZ4 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM48Q8IWZ4 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.63■□□□□ 0.09
TRIM48Q8IWZ4 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM48Q8IWZ4 AL691432.1-201ENST00000596308 1422 ntBASIC15.63■□□□□ 0.09
TRIM48Q8IWZ4 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.63■□□□□ 0.09
TRIM48Q8IWZ4 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.63■□□□□ 0.09
TRIM48Q8IWZ4 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
TRIM48Q8IWZ4 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM48Q8IWZ4 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM48Q8IWZ4 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM48Q8IWZ4 AL035633.1-201ENST00000406139 838 ntBASIC15.63■□□□□ 0.09
TRIM48Q8IWZ4 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.63■□□□□ 0.09
TRIM48Q8IWZ4 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.63■□□□□ 0.09
TRIM48Q8IWZ4 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM48Q8IWZ4 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.63■□□□□ 0.09
TRIM48Q8IWZ4 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM48Q8IWZ4 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM48Q8IWZ4 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM48Q8IWZ4 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.63■□□□□ 0.09
TRIM48Q8IWZ4 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM48Q8IWZ4 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.63■□□□□ 0.09
TRIM48Q8IWZ4 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.63■□□□□ 0.09
TRIM48Q8IWZ4 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.63■□□□□ 0.09
TRIM48Q8IWZ4 AC008738.7-201ENST00000609744 511 ntBASIC15.63■□□□□ 0.09
TRIM48Q8IWZ4 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.63■□□□□ 0.09
TRIM48Q8IWZ4 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM48Q8IWZ4 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM48Q8IWZ4 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM48Q8IWZ4 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM48Q8IWZ4 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM48Q8IWZ4 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM48Q8IWZ4 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM48Q8IWZ4 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
TRIM48Q8IWZ4 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM48Q8IWZ4 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
TRIM48Q8IWZ4 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM48Q8IWZ4 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM48Q8IWZ4 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM48Q8IWZ4 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.62■□□□□ 0.09
TRIM48Q8IWZ4 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM48Q8IWZ4 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM48Q8IWZ4 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.62■□□□□ 0.09
TRIM48Q8IWZ4 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.62■□□□□ 0.09
TRIM48Q8IWZ4 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
TRIM48Q8IWZ4 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM48Q8IWZ4 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
TRIM48Q8IWZ4 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM48Q8IWZ4 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM48Q8IWZ4 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.62■□□□□ 0.09
TRIM48Q8IWZ4 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM48Q8IWZ4 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
TRIM48Q8IWZ4 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms