Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 AC010491.1-201ENST00000563101 2797 ntBASIC15.57■□□□□ 0.08
LRRTM4Q86VH4 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
LRRTM4Q86VH4 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRRTM4Q86VH4 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LRRTM4Q86VH4 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
LRRTM4Q86VH4 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
LRRTM4Q86VH4 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.56■□□□□ 0.08
LRRTM4Q86VH4 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRRTM4Q86VH4 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
LRRTM4Q86VH4 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRRTM4Q86VH4 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRRTM4Q86VH4 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRRTM4Q86VH4 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
LRRTM4Q86VH4 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LRRTM4Q86VH4 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRRTM4Q86VH4 AL589987.1-201ENST00000453380 819 ntBASIC15.56■□□□□ 0.08
LRRTM4Q86VH4 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.56■□□□□ 0.08
LRRTM4Q86VH4 MEIS3P1-201ENST00000495167 958 ntBASIC15.56■□□□□ 0.08
LRRTM4Q86VH4 SLED1-202ENST00000512051 380 ntBASIC15.56■□□□□ 0.08
LRRTM4Q86VH4 FTH1-202ENST00000526640 786 ntTSL 2 BASIC15.56■□□□□ 0.08
LRRTM4Q86VH4 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.56■□□□□ 0.08
LRRTM4Q86VH4 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
LRRTM4Q86VH4 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRRTM4Q86VH4 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
LRRTM4Q86VH4 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
LRRTM4Q86VH4 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LRRTM4Q86VH4 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRRTM4Q86VH4 AC007541.1-201ENST00000570282 1469 ntBASIC15.56■□□□□ 0.08
LRRTM4Q86VH4 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRRTM4Q86VH4 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
LRRTM4Q86VH4 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
LRRTM4Q86VH4 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LRRTM4Q86VH4 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.56■□□□□ 0.08
LRRTM4Q86VH4 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LRRTM4Q86VH4 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRRTM4Q86VH4 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.56■□□□□ 0.08
LRRTM4Q86VH4 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRRTM4Q86VH4 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRRTM4Q86VH4 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LRRTM4Q86VH4 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LRRTM4Q86VH4 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LRRTM4Q86VH4 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
LRRTM4Q86VH4 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRRTM4Q86VH4 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRTM4Q86VH4 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRTM4Q86VH4 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRTM4Q86VH4 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
LRRTM4Q86VH4 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.55■□□□□ 0.08
LRRTM4Q86VH4 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRTM4Q86VH4 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRTM4Q86VH4 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
LRRTM4Q86VH4 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRTM4Q86VH4 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.55■□□□□ 0.08
LRRTM4Q86VH4 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
LRRTM4Q86VH4 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.55■□□□□ 0.08
LRRTM4Q86VH4 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LRRTM4Q86VH4 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRTM4Q86VH4 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LRRTM4Q86VH4 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.55■□□□□ 0.08
LRRTM4Q86VH4 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRTM4Q86VH4 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LRRTM4Q86VH4 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
LRRTM4Q86VH4 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRTM4Q86VH4 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.55■□□□□ 0.08
LRRTM4Q86VH4 AC015922.1-201ENST00000421102 1152 ntBASIC15.55■□□□□ 0.08
LRRTM4Q86VH4 MEP1AP4-201ENST00000423244 1087 ntBASIC15.55■□□□□ 0.08
LRRTM4Q86VH4 DFFBP1-201ENST00000433250 979 ntBASIC15.55■□□□□ 0.08
LRRTM4Q86VH4 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.55■□□□□ 0.08
LRRTM4Q86VH4 CD81-207ENST00000481687 890 ntTSL 2 BASIC15.55■□□□□ 0.08
LRRTM4Q86VH4 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRTM4Q86VH4 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRTM4Q86VH4 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
LRRTM4Q86VH4 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LRRTM4Q86VH4 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.55■□□□□ 0.08
LRRTM4Q86VH4 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.55■□□□□ 0.08
LRRTM4Q86VH4 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.55■□□□□ 0.08
LRRTM4Q86VH4 COX11-202ENST00000571584 1108 ntTSL 2 BASIC15.55■□□□□ 0.08
LRRTM4Q86VH4 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.55■□□□□ 0.08
LRRTM4Q86VH4 AF228730.6-201ENST00000641497 218 ntBASIC15.55■□□□□ 0.08
LRRTM4Q86VH4 AC084121.3-201ENST00000641716 218 ntBASIC15.55■□□□□ 0.08
LRRTM4Q86VH4 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.55■□□□□ 0.08
LRRTM4Q86VH4 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRTM4Q86VH4 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
LRRTM4Q86VH4 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRTM4Q86VH4 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRTM4Q86VH4 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRTM4Q86VH4 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
LRRTM4Q86VH4 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LRRTM4Q86VH4 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRTM4Q86VH4 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRTM4Q86VH4 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRTM4Q86VH4 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRTM4Q86VH4 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRTM4Q86VH4 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
LRRTM4Q86VH4 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
LRRTM4Q86VH4 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRRTM4Q86VH4 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRRTM4Q86VH4 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
LRRTM4Q86VH4 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRRTM4Q86VH4 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms