Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC10.4□□□□□ -0.74
VPS13DQ5THJ4 RN7SL181P-201ENST00000462921 277 ntBASIC10.4□□□□□ -0.74
VPS13DQ5THJ4 AC024681.1-201ENST00000521917 487 ntBASIC10.4□□□□□ -0.74
VPS13DQ5THJ4 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
VPS13DQ5THJ4 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC10.4□□□□□ -0.74
VPS13DQ5THJ4 AC106820.3-201ENST00000561653 397 ntBASIC10.4□□□□□ -0.74
VPS13DQ5THJ4 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC10.4□□□□□ -0.74
VPS13DQ5THJ4 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
VPS13DQ5THJ4 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC10.4□□□□□ -0.74
VPS13DQ5THJ4 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
VPS13DQ5THJ4 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC10.4□□□□□ -0.74
VPS13DQ5THJ4 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
VPS13DQ5THJ4 AC084364.1-201ENST00000551967 1556 ntBASIC10.4□□□□□ -0.74
VPS13DQ5THJ4 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
VPS13DQ5THJ4 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
VPS13DQ5THJ4 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
VPS13DQ5THJ4 AL139094.1-201ENST00000405549 1188 ntBASIC10.4□□□□□ -0.74
VPS13DQ5THJ4 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC10.4□□□□□ -0.74
VPS13DQ5THJ4 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
VPS13DQ5THJ4 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
VPS13DQ5THJ4 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC10.4□□□□□ -0.74
VPS13DQ5THJ4 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
VPS13DQ5THJ4 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
VPS13DQ5THJ4 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
VPS13DQ5THJ4 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
VPS13DQ5THJ4 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC10.4□□□□□ -0.74
VPS13DQ5THJ4 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
VPS13DQ5THJ4 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
VPS13DQ5THJ4 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
VPS13DQ5THJ4 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
VPS13DQ5THJ4 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
VPS13DQ5THJ4 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
VPS13DQ5THJ4 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
VPS13DQ5THJ4 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
VPS13DQ5THJ4 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
VPS13DQ5THJ4 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC10.4□□□□□ -0.74
VPS13DQ5THJ4 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC10.4□□□□□ -0.74
VPS13DQ5THJ4 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
VPS13DQ5THJ4 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.74
VPS13DQ5THJ4 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC10.4□□□□□ -0.74
VPS13DQ5THJ4 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
VPS13DQ5THJ4 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC10.4□□□□□ -0.74
VPS13DQ5THJ4 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
VPS13DQ5THJ4 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
VPS13DQ5THJ4 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.75
VPS13DQ5THJ4 AC069224.1-201ENST00000566372 1715 ntBASIC10.4□□□□□ -0.75
VPS13DQ5THJ4 KRTAP19-9P-201ENST00000421795 191 ntBASIC10.4□□□□□ -0.75
VPS13DQ5THJ4 MAGEA5-201ENST00000446757 942 ntBASIC10.4□□□□□ -0.75
VPS13DQ5THJ4 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC10.4□□□□□ -0.75
VPS13DQ5THJ4 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC10.4□□□□□ -0.75
VPS13DQ5THJ4 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC10.4□□□□□ -0.75
VPS13DQ5THJ4 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
VPS13DQ5THJ4 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
VPS13DQ5THJ4 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
VPS13DQ5THJ4 REXO1L5P-201ENST00000622260 2098 ntBASIC10.39□□□□□ -0.75
VPS13DQ5THJ4 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
VPS13DQ5THJ4 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
VPS13DQ5THJ4 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
VPS13DQ5THJ4 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC10.39□□□□□ -0.75
VPS13DQ5THJ4 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC10.39□□□□□ -0.75
VPS13DQ5THJ4 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC10.39□□□□□ -0.75
VPS13DQ5THJ4 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
VPS13DQ5THJ4 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
VPS13DQ5THJ4 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
VPS13DQ5THJ4 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
VPS13DQ5THJ4 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
VPS13DQ5THJ4 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
VPS13DQ5THJ4 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
VPS13DQ5THJ4 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
VPS13DQ5THJ4 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC10.39□□□□□ -0.75
VPS13DQ5THJ4 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
VPS13DQ5THJ4 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
VPS13DQ5THJ4 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
VPS13DQ5THJ4 AL645937.2-201ENST00000396808 931 ntBASIC10.39□□□□□ -0.75
VPS13DQ5THJ4 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC10.39□□□□□ -0.75
VPS13DQ5THJ4 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
VPS13DQ5THJ4 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
VPS13DQ5THJ4 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC10.39□□□□□ -0.75
VPS13DQ5THJ4 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
VPS13DQ5THJ4 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC10.39□□□□□ -0.75
VPS13DQ5THJ4 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
VPS13DQ5THJ4 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
VPS13DQ5THJ4 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
VPS13DQ5THJ4 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC10.39□□□□□ -0.75
VPS13DQ5THJ4 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC10.39□□□□□ -0.75
VPS13DQ5THJ4 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
VPS13DQ5THJ4 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC10.39□□□□□ -0.75
VPS13DQ5THJ4 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
VPS13DQ5THJ4 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
VPS13DQ5THJ4 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
VPS13DQ5THJ4 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
VPS13DQ5THJ4 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
VPS13DQ5THJ4 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
VPS13DQ5THJ4 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
VPS13DQ5THJ4 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
VPS13DQ5THJ4 AL596276.2-201ENST00000447525 331 ntBASIC10.39□□□□□ -0.75
VPS13DQ5THJ4 AC008267.1-201ENST00000474858 1069 ntBASIC10.39□□□□□ -0.75
VPS13DQ5THJ4 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC10.39□□□□□ -0.75
VPS13DQ5THJ4 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
VPS13DQ5THJ4 COX5BP1-201ENST00000507622 393 ntBASIC10.39□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms