Protein–RNA interactions for Protein: Q3SXM0

DCAF4L1, DDB1- and CUL4-associated factor 4-like protein 1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCAF4L1Q3SXM0 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
DCAF4L1Q3SXM0 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DCAF4L1Q3SXM0 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC17.1■□□□□ 0.33
DCAF4L1Q3SXM0 RPL13AP25-201ENST00000484130 612 ntBASIC17.1■□□□□ 0.33
DCAF4L1Q3SXM0 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
DCAF4L1Q3SXM0 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DCAF4L1Q3SXM0 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC17.1■□□□□ 0.33
DCAF4L1Q3SXM0 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC17.1■□□□□ 0.33
DCAF4L1Q3SXM0 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
DCAF4L1Q3SXM0 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC17.1■□□□□ 0.33
DCAF4L1Q3SXM0 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
DCAF4L1Q3SXM0 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
DCAF4L1Q3SXM0 WFDC1-204ENST00000613603 549 ntBASIC17.1■□□□□ 0.33
DCAF4L1Q3SXM0 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC17.1■□□□□ 0.33
DCAF4L1Q3SXM0 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DCAF4L1Q3SXM0 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DCAF4L1Q3SXM0 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DCAF4L1Q3SXM0 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
DCAF4L1Q3SXM0 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.1■□□□□ 0.33
DCAF4L1Q3SXM0 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.1■□□□□ 0.33
DCAF4L1Q3SXM0 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
DCAF4L1Q3SXM0 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
DCAF4L1Q3SXM0 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.1■□□□□ 0.33
DCAF4L1Q3SXM0 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DCAF4L1Q3SXM0 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DCAF4L1Q3SXM0 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
DCAF4L1Q3SXM0 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
DCAF4L1Q3SXM0 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
DCAF4L1Q3SXM0 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DCAF4L1Q3SXM0 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
DCAF4L1Q3SXM0 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.09■□□□□ 0.33
DCAF4L1Q3SXM0 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.09■□□□□ 0.33
DCAF4L1Q3SXM0 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
DCAF4L1Q3SXM0 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DCAF4L1Q3SXM0 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
DCAF4L1Q3SXM0 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
DCAF4L1Q3SXM0 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DCAF4L1Q3SXM0 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DCAF4L1Q3SXM0 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
DCAF4L1Q3SXM0 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
DCAF4L1Q3SXM0 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
DCAF4L1Q3SXM0 AL512384.1-201ENST00000406683 331 ntBASIC17.09■□□□□ 0.33
DCAF4L1Q3SXM0 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC17.09■□□□□ 0.33
DCAF4L1Q3SXM0 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC17.09■□□□□ 0.33
DCAF4L1Q3SXM0 GALT-202ENST00000450095 1280 ntTSL 2 BASIC17.09■□□□□ 0.33
DCAF4L1Q3SXM0 INE1-201ENST00000456273 945 ntBASIC17.09■□□□□ 0.33
DCAF4L1Q3SXM0 NEU3-203ENST00000529024 581 ntTSL 3 BASIC17.09■□□□□ 0.33
DCAF4L1Q3SXM0 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC17.09■□□□□ 0.33
DCAF4L1Q3SXM0 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC17.09■□□□□ 0.33
DCAF4L1Q3SXM0 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC17.09■□□□□ 0.33
DCAF4L1Q3SXM0 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
DCAF4L1Q3SXM0 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
DCAF4L1Q3SXM0 BRI3BPP1-201ENST00000594224 787 ntBASIC17.09■□□□□ 0.33
DCAF4L1Q3SXM0 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC17.09■□□□□ 0.33
DCAF4L1Q3SXM0 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
DCAF4L1Q3SXM0 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DCAF4L1Q3SXM0 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC17.09■□□□□ 0.33
DCAF4L1Q3SXM0 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
DCAF4L1Q3SXM0 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DCAF4L1Q3SXM0 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
DCAF4L1Q3SXM0 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
DCAF4L1Q3SXM0 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
DCAF4L1Q3SXM0 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
DCAF4L1Q3SXM0 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
DCAF4L1Q3SXM0 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
DCAF4L1Q3SXM0 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.09■□□□□ 0.33
DCAF4L1Q3SXM0 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.09■□□□□ 0.33
DCAF4L1Q3SXM0 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DCAF4L1Q3SXM0 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DCAF4L1Q3SXM0 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
DCAF4L1Q3SXM0 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
DCAF4L1Q3SXM0 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
DCAF4L1Q3SXM0 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
DCAF4L1Q3SXM0 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
DCAF4L1Q3SXM0 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC17.08■□□□□ 0.33
DCAF4L1Q3SXM0 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC17.08■□□□□ 0.33
DCAF4L1Q3SXM0 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.08■□□□□ 0.33
DCAF4L1Q3SXM0 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC17.08■□□□□ 0.33
DCAF4L1Q3SXM0 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
DCAF4L1Q3SXM0 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
DCAF4L1Q3SXM0 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.32
DCAF4L1Q3SXM0 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.32
DCAF4L1Q3SXM0 TK1-203ENST00000588734 1681 ntTSL 2 BASIC17.08■□□□□ 0.32
DCAF4L1Q3SXM0 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
DCAF4L1Q3SXM0 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.08■□□□□ 0.32
DCAF4L1Q3SXM0 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
DCAF4L1Q3SXM0 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
DCAF4L1Q3SXM0 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
DCAF4L1Q3SXM0 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC17.08■□□□□ 0.32
DCAF4L1Q3SXM0 WBP2-203ENST00000433525 928 ntTSL 2 BASIC17.08■□□□□ 0.32
DCAF4L1Q3SXM0 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC17.08■□□□□ 0.32
DCAF4L1Q3SXM0 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC17.08■□□□□ 0.32
DCAF4L1Q3SXM0 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC17.08■□□□□ 0.32
DCAF4L1Q3SXM0 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC17.08■□□□□ 0.32
DCAF4L1Q3SXM0 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC17.08■□□□□ 0.32
DCAF4L1Q3SXM0 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
DCAF4L1Q3SXM0 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC17.08■□□□□ 0.32
DCAF4L1Q3SXM0 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC17.08■□□□□ 0.32
DCAF4L1Q3SXM0 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
DCAF4L1Q3SXM0 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms