Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC16.94■□□□□ 0.3
CTC1Q2NKJ3 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC16.94■□□□□ 0.3
CTC1Q2NKJ3 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CTC1Q2NKJ3 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC16.94■□□□□ 0.3
CTC1Q2NKJ3 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.94■□□□□ 0.3
CTC1Q2NKJ3 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.94■□□□□ 0.3
CTC1Q2NKJ3 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CTC1Q2NKJ3 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTC1Q2NKJ3 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.94■□□□□ 0.3
CTC1Q2NKJ3 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC16.94■□□□□ 0.3
CTC1Q2NKJ3 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTC1Q2NKJ3 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
CTC1Q2NKJ3 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTC1Q2NKJ3 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTC1Q2NKJ3 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.94■□□□□ 0.3
CTC1Q2NKJ3 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.94■□□□□ 0.3
CTC1Q2NKJ3 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTC1Q2NKJ3 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTC1Q2NKJ3 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTC1Q2NKJ3 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTC1Q2NKJ3 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.93■□□□□ 0.3
CTC1Q2NKJ3 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTC1Q2NKJ3 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTC1Q2NKJ3 AL512652.2-201ENST00000625156 1716 ntBASIC16.93■□□□□ 0.3
CTC1Q2NKJ3 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.93■□□□□ 0.3
CTC1Q2NKJ3 AC005052.1-201ENST00000625181 2492 ntBASIC16.93■□□□□ 0.3
CTC1Q2NKJ3 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTC1Q2NKJ3 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
CTC1Q2NKJ3 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTC1Q2NKJ3 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTC1Q2NKJ3 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTC1Q2NKJ3 BCRP2-202ENST00000447763 634 ntBASIC16.93■□□□□ 0.3
CTC1Q2NKJ3 BCRP6-201ENST00000510112 632 ntBASIC16.93■□□□□ 0.3
CTC1Q2NKJ3 BCRP7-201ENST00000511549 544 ntBASIC16.93■□□□□ 0.3
CTC1Q2NKJ3 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.93■□□□□ 0.3
CTC1Q2NKJ3 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.93■□□□□ 0.3
CTC1Q2NKJ3 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
CTC1Q2NKJ3 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.93■□□□□ 0.3
CTC1Q2NKJ3 AC036164.1-201ENST00000570544 333 ntBASIC16.93■□□□□ 0.3
CTC1Q2NKJ3 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC16.93■□□□□ 0.3
CTC1Q2NKJ3 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CTC1Q2NKJ3 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CTC1Q2NKJ3 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.93■□□□□ 0.3
CTC1Q2NKJ3 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTC1Q2NKJ3 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTC1Q2NKJ3 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTC1Q2NKJ3 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CTC1Q2NKJ3 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTC1Q2NKJ3 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.93■□□□□ 0.3
CTC1Q2NKJ3 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTC1Q2NKJ3 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTC1Q2NKJ3 TP73-213ENST00000604479 1623 ntTSL 5 BASIC16.92■□□□□ 0.3
CTC1Q2NKJ3 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CTC1Q2NKJ3 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTC1Q2NKJ3 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
CTC1Q2NKJ3 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.92■□□□□ 0.3
CTC1Q2NKJ3 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.92■□□□□ 0.3
CTC1Q2NKJ3 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.92■□□□□ 0.3
CTC1Q2NKJ3 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
CTC1Q2NKJ3 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTC1Q2NKJ3 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CTC1Q2NKJ3 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.92■□□□□ 0.3
CTC1Q2NKJ3 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC16.92■□□□□ 0.3
CTC1Q2NKJ3 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CTC1Q2NKJ3 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTC1Q2NKJ3 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC16.92■□□□□ 0.3
CTC1Q2NKJ3 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTC1Q2NKJ3 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.92■□□□□ 0.3
CTC1Q2NKJ3 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC16.92■□□□□ 0.3
CTC1Q2NKJ3 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC16.92■□□□□ 0.3
CTC1Q2NKJ3 AP001889.1-201ENST00000525414 633 ntBASIC16.92■□□□□ 0.3
CTC1Q2NKJ3 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC16.92■□□□□ 0.3
CTC1Q2NKJ3 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC16.92■□□□□ 0.3
CTC1Q2NKJ3 NIFKP4-201ENST00000567275 1192 ntBASIC16.92■□□□□ 0.3
CTC1Q2NKJ3 BRI3BPP1-201ENST00000594224 787 ntBASIC16.92■□□□□ 0.3
CTC1Q2NKJ3 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC16.92■□□□□ 0.3
CTC1Q2NKJ3 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.92■□□□□ 0.3
CTC1Q2NKJ3 AL158212.4-201ENST00000624062 1286 ntBASIC16.92■□□□□ 0.3
CTC1Q2NKJ3 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTC1Q2NKJ3 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.92■□□□□ 0.3
CTC1Q2NKJ3 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTC1Q2NKJ3 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTC1Q2NKJ3 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.92■□□□□ 0.3
CTC1Q2NKJ3 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTC1Q2NKJ3 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTC1Q2NKJ3 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.92■□□□□ 0.3
CTC1Q2NKJ3 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.92■□□□□ 0.3
CTC1Q2NKJ3 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTC1Q2NKJ3 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.92■□□□□ 0.3
CTC1Q2NKJ3 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.92■□□□□ 0.3
CTC1Q2NKJ3 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.92■□□□□ 0.3
CTC1Q2NKJ3 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTC1Q2NKJ3 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CTC1Q2NKJ3 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
CTC1Q2NKJ3 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CTC1Q2NKJ3 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.91■□□□□ 0.3
CTC1Q2NKJ3 AC104640.1-201ENST00000562617 2109 ntBASIC16.91■□□□□ 0.3
CTC1Q2NKJ3 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.91■□□□□ 0.3
CTC1Q2NKJ3 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.91■□□□□ 0.3
CTC1Q2NKJ3 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms