Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RSPO4Q2I0M5 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
RSPO4Q2I0M5 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RSPO4Q2I0M5 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
RSPO4Q2I0M5 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RSPO4Q2I0M5 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RSPO4Q2I0M5 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RSPO4Q2I0M5 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RSPO4Q2I0M5 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
RSPO4Q2I0M5 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RSPO4Q2I0M5 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.24■□□□□ 0.03
RSPO4Q2I0M5 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RSPO4Q2I0M5 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
RSPO4Q2I0M5 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RSPO4Q2I0M5 AL023775.1-201ENST00000454907 1746 ntBASIC15.24■□□□□ 0.03
RSPO4Q2I0M5 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RSPO4Q2I0M5 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.24■□□□□ 0.03
RSPO4Q2I0M5 AC099398.1-201ENST00000567919 2776 ntBASIC15.24■□□□□ 0.03
RSPO4Q2I0M5 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RSPO4Q2I0M5 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
RSPO4Q2I0M5 NDUFAB1P1-201ENST00000404262 460 ntBASIC15.24■□□□□ 0.03
RSPO4Q2I0M5 PARVG-202ENST00000415224 999 ntTSL 2 BASIC15.24■□□□□ 0.03
RSPO4Q2I0M5 FGFR3P1-201ENST00000449999 601 ntBASIC15.24■□□□□ 0.03
RSPO4Q2I0M5 NOC2LP1-201ENST00000450578 752 ntBASIC15.24■□□□□ 0.03
RSPO4Q2I0M5 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC15.24■□□□□ 0.03
RSPO4Q2I0M5 RN7SL181P-201ENST00000462921 277 ntBASIC15.24■□□□□ 0.03
RSPO4Q2I0M5 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.24■□□□□ 0.03
RSPO4Q2I0M5 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
RSPO4Q2I0M5 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC15.24■□□□□ 0.03
RSPO4Q2I0M5 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RSPO4Q2I0M5 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.24■□□□□ 0.03
RSPO4Q2I0M5 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RSPO4Q2I0M5 AP005019.2-201ENST00000615104 511 ntBASIC15.24■□□□□ 0.03
RSPO4Q2I0M5 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC15.24■□□□□ 0.03
RSPO4Q2I0M5 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC15.24■□□□□ 0.03
RSPO4Q2I0M5 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RSPO4Q2I0M5 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC15.24■□□□□ 0.03
RSPO4Q2I0M5 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RSPO4Q2I0M5 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
RSPO4Q2I0M5 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
RSPO4Q2I0M5 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RSPO4Q2I0M5 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RSPO4Q2I0M5 FOS-202ENST00000535987 1402 ntTSL 2 BASIC15.24■□□□□ 0.03
RSPO4Q2I0M5 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.24■□□□□ 0.03
RSPO4Q2I0M5 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RSPO4Q2I0M5 AC079328.2-201ENST00000561241 3354 ntBASIC15.24■□□□□ 0.03
RSPO4Q2I0M5 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
RSPO4Q2I0M5 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RSPO4Q2I0M5 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RSPO4Q2I0M5 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.23■□□□□ 0.03
RSPO4Q2I0M5 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
RSPO4Q2I0M5 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC15.23■□□□□ 0.03
RSPO4Q2I0M5 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RSPO4Q2I0M5 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
RSPO4Q2I0M5 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RSPO4Q2I0M5 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC15.23■□□□□ 0.03
RSPO4Q2I0M5 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RSPO4Q2I0M5 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
RSPO4Q2I0M5 AC004987.2-201ENST00000395959 1148 ntBASIC15.23■□□□□ 0.03
RSPO4Q2I0M5 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RSPO4Q2I0M5 AC079178.1-201ENST00000420915 656 ntBASIC15.23■□□□□ 0.03
RSPO4Q2I0M5 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RSPO4Q2I0M5 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC15.23■□□□□ 0.03
RSPO4Q2I0M5 AC026410.3-201ENST00000514280 936 ntBASIC15.23■□□□□ 0.03
RSPO4Q2I0M5 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.23■□□□□ 0.03
RSPO4Q2I0M5 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC15.23■□□□□ 0.03
RSPO4Q2I0M5 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.23■□□□□ 0.03
RSPO4Q2I0M5 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC15.23■□□□□ 0.03
RSPO4Q2I0M5 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.23■□□□□ 0.03
RSPO4Q2I0M5 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.23■□□□□ 0.03
RSPO4Q2I0M5 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
RSPO4Q2I0M5 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
RSPO4Q2I0M5 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RSPO4Q2I0M5 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RSPO4Q2I0M5 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RSPO4Q2I0M5 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RSPO4Q2I0M5 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RSPO4Q2I0M5 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RSPO4Q2I0M5 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RSPO4Q2I0M5 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
RSPO4Q2I0M5 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RSPO4Q2I0M5 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RSPO4Q2I0M5 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
RSPO4Q2I0M5 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.23■□□□□ 0.03
RSPO4Q2I0M5 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RSPO4Q2I0M5 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.22■□□□□ 0.03
RSPO4Q2I0M5 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RSPO4Q2I0M5 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.22■□□□□ 0.03
RSPO4Q2I0M5 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RSPO4Q2I0M5 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RSPO4Q2I0M5 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
RSPO4Q2I0M5 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RSPO4Q2I0M5 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RSPO4Q2I0M5 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
RSPO4Q2I0M5 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
RSPO4Q2I0M5 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.22■□□□□ 0.03
RSPO4Q2I0M5 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RSPO4Q2I0M5 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.22■□□□□ 0.03
RSPO4Q2I0M5 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RSPO4Q2I0M5 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms