Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
IRX4P78413 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
IRX4P78413 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
IRX4P78413 AC100757.3-201ENST00000622361 1406 ntBASIC16.62■□□□□ 0.25
IRX4P78413 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
IRX4P78413 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
IRX4P78413 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IRX4P78413 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
IRX4P78413 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
IRX4P78413 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.61■□□□□ 0.25
IRX4P78413 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
IRX4P78413 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
IRX4P78413 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
IRX4P78413 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
IRX4P78413 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
IRX4P78413 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.61■□□□□ 0.25
IRX4P78413 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.61■□□□□ 0.25
IRX4P78413 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.61■□□□□ 0.25
IRX4P78413 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
IRX4P78413 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.61■□□□□ 0.25
IRX4P78413 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.61■□□□□ 0.25
IRX4P78413 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.61■□□□□ 0.25
IRX4P78413 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
IRX4P78413 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
IRX4P78413 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
IRX4P78413 AC004233.3-201ENST00000607794 1269 ntBASIC16.61■□□□□ 0.25
IRX4P78413 AC073592.8-201ENST00000624126 511 ntBASIC16.61■□□□□ 0.25
IRX4P78413 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
IRX4P78413 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IRX4P78413 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.61■□□□□ 0.25
IRX4P78413 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
IRX4P78413 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IRX4P78413 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
IRX4P78413 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IRX4P78413 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
IRX4P78413 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.61■□□□□ 0.25
IRX4P78413 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IRX4P78413 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
IRX4P78413 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
IRX4P78413 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IRX4P78413 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
IRX4P78413 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
IRX4P78413 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IRX4P78413 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IRX4P78413 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
IRX4P78413 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IRX4P78413 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
IRX4P78413 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
IRX4P78413 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IRX4P78413 AL512652.2-201ENST00000625156 1716 ntBASIC16.6■□□□□ 0.25
IRX4P78413 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
IRX4P78413 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
IRX4P78413 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
IRX4P78413 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
IRX4P78413 SNX33P1-201ENST00000592116 1762 ntBASIC16.6■□□□□ 0.25
IRX4P78413 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
IRX4P78413 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IRX4P78413 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
IRX4P78413 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
IRX4P78413 TSSK5P-201ENST00000423978 907 ntBASIC16.6■□□□□ 0.25
IRX4P78413 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.6■□□□□ 0.25
IRX4P78413 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC16.6■□□□□ 0.25
IRX4P78413 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.6■□□□□ 0.25
IRX4P78413 NAA50-208ENST00000497255 789 ntTSL 5 BASIC16.6■□□□□ 0.25
IRX4P78413 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
IRX4P78413 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
IRX4P78413 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC16.6■□□□□ 0.25
IRX4P78413 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.6■□□□□ 0.25
IRX4P78413 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.6■□□□□ 0.25
IRX4P78413 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC16.6■□□□□ 0.25
IRX4P78413 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
IRX4P78413 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
IRX4P78413 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IRX4P78413 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
IRX4P78413 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
IRX4P78413 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.6■□□□□ 0.25
IRX4P78413 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IRX4P78413 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.6■□□□□ 0.25
IRX4P78413 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
IRX4P78413 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
IRX4P78413 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
IRX4P78413 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
IRX4P78413 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.6■□□□□ 0.25
IRX4P78413 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
IRX4P78413 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
IRX4P78413 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IRX4P78413 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
IRX4P78413 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
IRX4P78413 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
IRX4P78413 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
IRX4P78413 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
IRX4P78413 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
IRX4P78413 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
IRX4P78413 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
IRX4P78413 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.59■□□□□ 0.25
IRX4P78413 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
IRX4P78413 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.59■□□□□ 0.25
IRX4P78413 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
IRX4P78413 AP003680.1-201ENST00000598970 3660 ntBASIC16.59■□□□□ 0.25
IRX4P78413 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms