Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
RPL39P62891 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
RPL39P62891 EMD-201ENST00000369835 966 ntTSL 3 BASIC11.29□□□□□ -0.6
RPL39P62891 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
RPL39P62891 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
RPL39P62891 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC11.29□□□□□ -0.6
RPL39P62891 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC11.29□□□□□ -0.6
RPL39P62891 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
RPL39P62891 NMU-205ENST00000511469 756 ntTSL 3 BASIC11.29□□□□□ -0.6
RPL39P62891 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC11.29□□□□□ -0.6
RPL39P62891 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
RPL39P62891 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC11.29□□□□□ -0.6
RPL39P62891 EHF-205ENST00000527935 557 ntTSL 2 BASIC11.29□□□□□ -0.6
RPL39P62891 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC11.29□□□□□ -0.6
RPL39P62891 CYB561-216ENST00000582297 897 ntTSL 3 BASIC11.29□□□□□ -0.6
RPL39P62891 AC021097.1-201ENST00000607902 574 ntBASIC11.29□□□□□ -0.6
RPL39P62891 HADH-212ENST00000638621 741 ntTSL 5 BASIC11.29□□□□□ -0.6
RPL39P62891 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC11.29□□□□□ -0.6
RPL39P62891 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC11.29□□□□□ -0.6
RPL39P62891 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC11.29□□□□□ -0.6
RPL39P62891 AL390755.1-201ENST00000623716 2027 ntBASIC11.29□□□□□ -0.6
RPL39P62891 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RPL39P62891 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RPL39P62891 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
RPL39P62891 TNN-203ENST00000622870 3719 ntTSL 5 BASIC11.29□□□□□ -0.6
RPL39P62891 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC11.29□□□□□ -0.6
RPL39P62891 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
RPL39P62891 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RPL39P62891 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
RPL39P62891 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC11.29□□□□□ -0.6
RPL39P62891 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC11.29□□□□□ -0.6
RPL39P62891 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RPL39P62891 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC11.29□□□□□ -0.6
RPL39P62891 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
RPL39P62891 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RPL39P62891 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
RPL39P62891 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
RPL39P62891 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
RPL39P62891 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC11.29□□□□□ -0.6
RPL39P62891 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RPL39P62891 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
RPL39P62891 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC11.29□□□□□ -0.6
RPL39P62891 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RPL39P62891 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
RPL39P62891 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
RPL39P62891 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
RPL39P62891 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
RPL39P62891 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC11.28□□□□□ -0.6
RPL39P62891 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
RPL39P62891 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
RPL39P62891 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
RPL39P62891 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
RPL39P62891 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RPL39P62891 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
RPL39P62891 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RPL39P62891 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RPL39P62891 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RPL39P62891 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RPL39P62891 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RPL39P62891 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RPL39P62891 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RPL39P62891 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RPL39P62891 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RPL39P62891 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RPL39P62891 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
RPL39P62891 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
RPL39P62891 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
RPL39P62891 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
RPL39P62891 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RPL39P62891 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
RPL39P62891 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC11.28□□□□□ -0.6
RPL39P62891 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RPL39P62891 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC11.28□□□□□ -0.6
RPL39P62891 RPS15P9-201ENST00000494093 319 ntBASIC11.28□□□□□ -0.6
RPL39P62891 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
RPL39P62891 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC11.28□□□□□ -0.6
RPL39P62891 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC11.28□□□□□ -0.6
RPL39P62891 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC11.28□□□□□ -0.6
RPL39P62891 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RPL39P62891 AC092119.3-201ENST00000612618 583 ntBASIC11.28□□□□□ -0.6
RPL39P62891 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC11.28□□□□□ -0.6
RPL39P62891 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC11.28□□□□□ -0.6
RPL39P62891 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC11.28□□□□□ -0.6
RPL39P62891 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC11.28□□□□□ -0.6
RPL39P62891 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
RPL39P62891 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
RPL39P62891 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
RPL39P62891 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RPL39P62891 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC11.28□□□□□ -0.6
RPL39P62891 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
RPL39P62891 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RPL39P62891 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC11.28□□□□□ -0.6
RPL39P62891 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RPL39P62891 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RPL39P62891 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC11.28□□□□□ -0.6
RPL39P62891 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RPL39P62891 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC11.28□□□□□ -0.6
RPL39P62891 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RPL39P62891 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC11.28□□□□□ -0.6
RPL39P62891 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms