Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CXCR4P61073 AC023024.2-201ENST00000623561 1993 ntBASIC14.52□□□□□ -0.09
CXCR4P61073 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CXCR4P61073 BEND3P1-201ENST00000421591 1944 ntBASIC14.52□□□□□ -0.09
CXCR4P61073 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
CXCR4P61073 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CXCR4P61073 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CXCR4P61073 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.52□□□□□ -0.09
CXCR4P61073 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.52□□□□□ -0.09
CXCR4P61073 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CXCR4P61073 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CXCR4P61073 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CXCR4P61073 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CXCR4P61073 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CXCR4P61073 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.52□□□□□ -0.09
CXCR4P61073 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CXCR4P61073 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CXCR4P61073 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
CXCR4P61073 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CXCR4P61073 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CXCR4P61073 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
CXCR4P61073 AC126755.1-201ENST00000525846 6405 ntBASIC14.51□□□□□ -0.09
CXCR4P61073 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CXCR4P61073 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CXCR4P61073 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CXCR4P61073 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CXCR4P61073 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CXCR4P61073 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CXCR4P61073 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CXCR4P61073 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CXCR4P61073 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CXCR4P61073 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CXCR4P61073 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CXCR4P61073 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.51□□□□□ -0.09
CXCR4P61073 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.51□□□□□ -0.09
CXCR4P61073 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.51□□□□□ -0.09
CXCR4P61073 AC127383.1-201ENST00000444697 1800 ntBASIC14.51□□□□□ -0.09
CXCR4P61073 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC14.51□□□□□ -0.09
CXCR4P61073 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.51□□□□□ -0.09
CXCR4P61073 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC14.51□□□□□ -0.09
CXCR4P61073 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC14.51□□□□□ -0.09
CXCR4P61073 AC073648.2-201ENST00000510116 352 ntBASIC14.51□□□□□ -0.09
CXCR4P61073 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CXCR4P61073 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.51□□□□□ -0.09
CXCR4P61073 MIR4321-201ENST00000592276 80 ntBASIC14.51□□□□□ -0.09
CXCR4P61073 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
CXCR4P61073 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CXCR4P61073 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CXCR4P61073 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
CXCR4P61073 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
CXCR4P61073 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.51□□□□□ -0.09
CXCR4P61073 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CXCR4P61073 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.51□□□□□ -0.09
CXCR4P61073 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CXCR4P61073 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.51□□□□□ -0.09
CXCR4P61073 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.51□□□□□ -0.09
CXCR4P61073 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CXCR4P61073 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CXCR4P61073 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.51□□□□□ -0.09
CXCR4P61073 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CXCR4P61073 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CXCR4P61073 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CXCR4P61073 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CXCR4P61073 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CXCR4P61073 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.51□□□□□ -0.09
CXCR4P61073 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.51□□□□□ -0.09
CXCR4P61073 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
CXCR4P61073 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CXCR4P61073 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CXCR4P61073 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CXCR4P61073 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CXCR4P61073 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CXCR4P61073 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CXCR4P61073 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CXCR4P61073 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.5□□□□□ -0.09
CXCR4P61073 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
CXCR4P61073 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CXCR4P61073 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
CXCR4P61073 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.5□□□□□ -0.09
CXCR4P61073 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CXCR4P61073 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CXCR4P61073 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CXCR4P61073 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CXCR4P61073 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CXCR4P61073 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CXCR4P61073 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC14.5□□□□□ -0.09
CXCR4P61073 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC14.5□□□□□ -0.09
CXCR4P61073 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CXCR4P61073 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CXCR4P61073 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC14.5□□□□□ -0.09
CXCR4P61073 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC14.5□□□□□ -0.09
CXCR4P61073 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.5□□□□□ -0.09
CXCR4P61073 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.5□□□□□ -0.09
CXCR4P61073 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
CXCR4P61073 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CXCR4P61073 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC14.5□□□□□ -0.09
CXCR4P61073 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CXCR4P61073 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.5□□□□□ -0.09
CXCR4P61073 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CXCR4P61073 AC134407.2-201ENST00000625089 1978 ntBASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms