Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
SPCS3P61009 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.02□□□□□ -0.33
SPCS3P61009 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
SPCS3P61009 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
SPCS3P61009 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
SPCS3P61009 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SPCS3P61009 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SPCS3P61009 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
SPCS3P61009 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SPCS3P61009 OR2I1P-210ENST00000642037 4691 ntBASIC13.01□□□□□ -0.33
SPCS3P61009 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
SPCS3P61009 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SPCS3P61009 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.01□□□□□ -0.33
SPCS3P61009 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC13.01□□□□□ -0.33
SPCS3P61009 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SPCS3P61009 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
SPCS3P61009 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SPCS3P61009 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SPCS3P61009 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.01□□□□□ -0.33
SPCS3P61009 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
SPCS3P61009 RPS2P28-201ENST00000314255 741 ntBASIC13.01□□□□□ -0.33
SPCS3P61009 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SPCS3P61009 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SPCS3P61009 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
SPCS3P61009 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SPCS3P61009 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC13.01□□□□□ -0.33
SPCS3P61009 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC13.01□□□□□ -0.33
SPCS3P61009 PRSS29P-201ENST00000440800 595 ntBASIC13.01□□□□□ -0.33
SPCS3P61009 FIS1-203ENST00000442303 631 ntTSL 3 BASIC13.01□□□□□ -0.33
SPCS3P61009 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC13.01□□□□□ -0.33
SPCS3P61009 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC13.01□□□□□ -0.33
SPCS3P61009 RNPS1P1-201ENST00000507437 918 ntBASIC13.01□□□□□ -0.33
SPCS3P61009 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SPCS3P61009 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC13.01□□□□□ -0.33
SPCS3P61009 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SPCS3P61009 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC13.01□□□□□ -0.33
SPCS3P61009 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC13.01□□□□□ -0.33
SPCS3P61009 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC13.01□□□□□ -0.33
SPCS3P61009 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
SPCS3P61009 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC13.01□□□□□ -0.33
SPCS3P61009 CLEC4GP1-201ENST00000596555 870 ntBASIC13.01□□□□□ -0.33
SPCS3P61009 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SPCS3P61009 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SPCS3P61009 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SPCS3P61009 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SPCS3P61009 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SPCS3P61009 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SPCS3P61009 AC006486.2-201ENST00000624246 2199 ntBASIC13.01□□□□□ -0.33
SPCS3P61009 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SPCS3P61009 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
SPCS3P61009 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
SPCS3P61009 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SPCS3P61009 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SPCS3P61009 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
SPCS3P61009 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SPCS3P61009 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.01□□□□□ -0.33
SPCS3P61009 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
SPCS3P61009 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
SPCS3P61009 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
SPCS3P61009 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
SPCS3P61009 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SPCS3P61009 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SPCS3P61009 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
SPCS3P61009 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
SPCS3P61009 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SPCS3P61009 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SPCS3P61009 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC13□□□□□ -0.33
SPCS3P61009 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13□□□□□ -0.33
SPCS3P61009 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
SPCS3P61009 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SPCS3P61009 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SPCS3P61009 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13□□□□□ -0.33
SPCS3P61009 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13□□□□□ -0.33
SPCS3P61009 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SPCS3P61009 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13□□□□□ -0.33
SPCS3P61009 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SPCS3P61009 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
SPCS3P61009 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SPCS3P61009 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SPCS3P61009 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC13□□□□□ -0.33
SPCS3P61009 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC13□□□□□ -0.33
SPCS3P61009 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
SPCS3P61009 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC13□□□□□ -0.33
SPCS3P61009 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC13□□□□□ -0.33
SPCS3P61009 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC13□□□□□ -0.33
SPCS3P61009 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC13□□□□□ -0.33
SPCS3P61009 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC13□□□□□ -0.33
SPCS3P61009 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SPCS3P61009 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
SPCS3P61009 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC13□□□□□ -0.33
SPCS3P61009 AL513480.1-201ENST00000451731 511 ntBASIC13□□□□□ -0.33
SPCS3P61009 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC13□□□□□ -0.33
SPCS3P61009 KRT18P34-201ENST00000488218 1270 ntBASIC13□□□□□ -0.33
SPCS3P61009 SKP2-204ENST00000508514 821 ntTSL 3 BASIC13□□□□□ -0.33
SPCS3P61009 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC13□□□□□ -0.33
SPCS3P61009 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC13□□□□□ -0.33
SPCS3P61009 TBCB-205ENST00000585746 875 ntTSL 3 BASIC13□□□□□ -0.33
SPCS3P61009 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SPCS3P61009 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
SPCS3P61009 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms