Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 NAA50-208ENST00000497255 789 ntTSL 5 BASIC18.2■□□□□ 0.5
CHMP4BP1P59074 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC18.2■□□□□ 0.5
CHMP4BP1P59074 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP4BP1P59074 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP4BP1P59074 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC18.2■□□□□ 0.5
CHMP4BP1P59074 TP53TG3HP-202ENST00000569755 579 ntBASIC18.2■□□□□ 0.5
CHMP4BP1P59074 ARL16-202ENST00000570561 768 ntTSL 2 BASIC18.2■□□□□ 0.5
CHMP4BP1P59074 AC140912.1-201ENST00000577171 1054 ntBASIC18.2■□□□□ 0.5
CHMP4BP1P59074 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC18.2■□□□□ 0.5
CHMP4BP1P59074 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC18.2■□□□□ 0.5
CHMP4BP1P59074 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC18.2■□□□□ 0.5
CHMP4BP1P59074 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP4BP1P59074 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC18.2■□□□□ 0.5
CHMP4BP1P59074 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP4BP1P59074 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP4BP1P59074 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC18.2■□□□□ 0.5
CHMP4BP1P59074 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CHMP4BP1P59074 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
CHMP4BP1P59074 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CHMP4BP1P59074 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC18.2■□□□□ 0.5
CHMP4BP1P59074 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP4BP1P59074 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP4BP1P59074 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC18.2■□□□□ 0.5
CHMP4BP1P59074 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC18.2■□□□□ 0.5
CHMP4BP1P59074 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CHMP4BP1P59074 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP4BP1P59074 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP4BP1P59074 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP4BP1P59074 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP4BP1P59074 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC18.19■□□□□ 0.5
CHMP4BP1P59074 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP4BP1P59074 AL031731.1-201ENST00000642131 2094 ntBASIC18.19■□□□□ 0.5
CHMP4BP1P59074 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP4BP1P59074 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP4BP1P59074 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC18.19■□□□□ 0.5
CHMP4BP1P59074 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP4BP1P59074 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP4BP1P59074 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CHMP4BP1P59074 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP4BP1P59074 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP4BP1P59074 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP4BP1P59074 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC18.19■□□□□ 0.5
CHMP4BP1P59074 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP4BP1P59074 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
CHMP4BP1P59074 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CHMP4BP1P59074 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
CHMP4BP1P59074 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP4BP1P59074 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP4BP1P59074 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP4BP1P59074 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC18.19■□□□□ 0.5
CHMP4BP1P59074 AC093724.1-201ENST00000448659 1027 ntBASIC18.19■□□□□ 0.5
CHMP4BP1P59074 API5-211ENST00000534695 560 ntTSL 5 BASIC18.19■□□□□ 0.5
CHMP4BP1P59074 AL512361.1-201ENST00000554200 418 ntBASIC18.19■□□□□ 0.5
CHMP4BP1P59074 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC18.19■□□□□ 0.5
CHMP4BP1P59074 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC18.19■□□□□ 0.5
CHMP4BP1P59074 AC024267.1-201ENST00000582320 895 ntBASIC18.19■□□□□ 0.5
CHMP4BP1P59074 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.19■□□□□ 0.5
CHMP4BP1P59074 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC18.19■□□□□ 0.5
CHMP4BP1P59074 MTHFR-217ENST00000641820 1569 ntBASIC18.19■□□□□ 0.5
CHMP4BP1P59074 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP4BP1P59074 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP4BP1P59074 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP4BP1P59074 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP4BP1P59074 GPAA1P2-202ENST00000606848 1787 ntBASIC18.19■□□□□ 0.5
CHMP4BP1P59074 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP4BP1P59074 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP4BP1P59074 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC18.19■□□□□ 0.5
CHMP4BP1P59074 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP4BP1P59074 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC18.19■□□□□ 0.5
CHMP4BP1P59074 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CHMP4BP1P59074 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC18.19■□□□□ 0.5
CHMP4BP1P59074 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP4BP1P59074 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP4BP1P59074 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP4BP1P59074 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP4BP1P59074 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP4BP1P59074 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP4BP1P59074 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP4BP1P59074 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP4BP1P59074 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
CHMP4BP1P59074 AL589702.1-201ENST00000641229 1509 ntBASIC18.18■□□□□ 0.5
CHMP4BP1P59074 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP4BP1P59074 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC18.18■□□□□ 0.5
CHMP4BP1P59074 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP4BP1P59074 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP4BP1P59074 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP4BP1P59074 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC18.18■□□□□ 0.5
CHMP4BP1P59074 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP4BP1P59074 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP4BP1P59074 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP4BP1P59074 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CHMP4BP1P59074 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP4BP1P59074 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
CHMP4BP1P59074 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC18.18■□□□□ 0.5
CHMP4BP1P59074 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
CHMP4BP1P59074 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP4BP1P59074 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP4BP1P59074 DGCR5-201ENST00000399539 862 ntBASIC18.18■□□□□ 0.5
CHMP4BP1P59074 AL353779.1-201ENST00000434793 351 ntBASIC18.18■□□□□ 0.5
CHMP4BP1P59074 SPDYE18-201ENST00000510091 1050 ntBASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms