Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC18.56■□□□□ 0.56
RHBDL3P58872 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RHBDL3P58872 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RHBDL3P58872 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC18.56■□□□□ 0.56
RHBDL3P58872 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RHBDL3P58872 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RHBDL3P58872 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RHBDL3P58872 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RHBDL3P58872 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RHBDL3P58872 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
RHBDL3P58872 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RHBDL3P58872 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RHBDL3P58872 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RHBDL3P58872 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RHBDL3P58872 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC18.55■□□□□ 0.56
RHBDL3P58872 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC18.55■□□□□ 0.56
RHBDL3P58872 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC18.55■□□□□ 0.56
RHBDL3P58872 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC18.55■□□□□ 0.56
RHBDL3P58872 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC18.55■□□□□ 0.56
RHBDL3P58872 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC18.55■□□□□ 0.56
RHBDL3P58872 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC18.55■□□□□ 0.56
RHBDL3P58872 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RHBDL3P58872 TECR-220ENST00000600083 1204 ntTSL 2 BASIC18.55■□□□□ 0.56
RHBDL3P58872 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC18.55■□□□□ 0.56
RHBDL3P58872 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RHBDL3P58872 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RHBDL3P58872 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
RHBDL3P58872 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RHBDL3P58872 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
RHBDL3P58872 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RHBDL3P58872 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RHBDL3P58872 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC18.55■□□□□ 0.56
RHBDL3P58872 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RHBDL3P58872 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RHBDL3P58872 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RHBDL3P58872 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RHBDL3P58872 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RHBDL3P58872 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC18.54■□□□□ 0.56
RHBDL3P58872 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC18.54■□□□□ 0.56
RHBDL3P58872 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RHBDL3P58872 AC010491.1-201ENST00000563101 2797 ntBASIC18.54■□□□□ 0.56
RHBDL3P58872 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RHBDL3P58872 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RHBDL3P58872 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RHBDL3P58872 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RHBDL3P58872 FAM86MP-201ENST00000340703 885 ntBASIC18.54■□□□□ 0.56
RHBDL3P58872 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
RHBDL3P58872 PGGT1BP2-201ENST00000398621 1028 ntBASIC18.54■□□□□ 0.56
RHBDL3P58872 MIR1908-201ENST00000410394 80 ntBASIC18.54■□□□□ 0.56
RHBDL3P58872 AC026954.1-201ENST00000429771 1293 ntBASIC18.54■□□□□ 0.56
RHBDL3P58872 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC18.54■□□□□ 0.56
RHBDL3P58872 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
RHBDL3P58872 AC022494.1-201ENST00000466044 728 ntBASIC18.54■□□□□ 0.56
RHBDL3P58872 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC18.54■□□□□ 0.56
RHBDL3P58872 RNA5SP412-201ENST00000516234 123 ntBASIC18.54■□□□□ 0.56
RHBDL3P58872 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC18.54■□□□□ 0.56
RHBDL3P58872 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC18.54■□□□□ 0.56
RHBDL3P58872 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC18.54■□□□□ 0.56
RHBDL3P58872 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC18.54■□□□□ 0.56
RHBDL3P58872 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC18.54■□□□□ 0.56
RHBDL3P58872 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC18.54■□□□□ 0.56
RHBDL3P58872 AC025181.2-201ENST00000606994 802 ntBASIC18.54■□□□□ 0.56
RHBDL3P58872 AP005019.2-201ENST00000615104 511 ntBASIC18.54■□□□□ 0.56
RHBDL3P58872 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RHBDL3P58872 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RHBDL3P58872 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC18.54■□□□□ 0.56
RHBDL3P58872 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RHBDL3P58872 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RHBDL3P58872 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RHBDL3P58872 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
RHBDL3P58872 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC18.54■□□□□ 0.56
RHBDL3P58872 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC18.54■□□□□ 0.56
RHBDL3P58872 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC18.54■□□□□ 0.56
RHBDL3P58872 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RHBDL3P58872 AC022188.1-201ENST00000620960 1664 ntBASIC18.54■□□□□ 0.56
RHBDL3P58872 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RHBDL3P58872 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.53■□□□□ 0.56
RHBDL3P58872 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RHBDL3P58872 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RHBDL3P58872 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RHBDL3P58872 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RHBDL3P58872 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC18.53■□□□□ 0.56
RHBDL3P58872 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RHBDL3P58872 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
RHBDL3P58872 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RHBDL3P58872 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
RHBDL3P58872 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC18.53■□□□□ 0.56
RHBDL3P58872 RPF1-202ENST00000370656 724 ntTSL 2 BASIC18.53■□□□□ 0.56
RHBDL3P58872 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RHBDL3P58872 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RHBDL3P58872 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC18.53■□□□□ 0.56
RHBDL3P58872 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.53■□□□□ 0.56
RHBDL3P58872 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RHBDL3P58872 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC18.53■□□□□ 0.56
RHBDL3P58872 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RHBDL3P58872 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC18.53■□□□□ 0.56
RHBDL3P58872 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RHBDL3P58872 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RHBDL3P58872 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC18.53■□□□□ 0.56
RHBDL3P58872 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms