Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
CMC4P56277 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
CMC4P56277 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CMC4P56277 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CMC4P56277 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
CMC4P56277 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CMC4P56277 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
CMC4P56277 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
CMC4P56277 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CMC4P56277 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC11.82□□□□□ -0.52
CMC4P56277 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC11.82□□□□□ -0.52
CMC4P56277 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC11.82□□□□□ -0.52
CMC4P56277 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC11.82□□□□□ -0.52
CMC4P56277 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC11.82□□□□□ -0.52
CMC4P56277 USP40-206ENST00000443711 628 ntTSL 2 BASIC11.82□□□□□ -0.52
CMC4P56277 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC11.82□□□□□ -0.52
CMC4P56277 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CMC4P56277 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC11.82□□□□□ -0.52
CMC4P56277 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
CMC4P56277 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC11.82□□□□□ -0.52
CMC4P56277 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC11.82□□□□□ -0.52
CMC4P56277 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC11.82□□□□□ -0.52
CMC4P56277 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CMC4P56277 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CMC4P56277 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
CMC4P56277 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC11.82□□□□□ -0.52
CMC4P56277 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
CMC4P56277 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC11.82□□□□□ -0.52
CMC4P56277 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CMC4P56277 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
CMC4P56277 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CMC4P56277 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CMC4P56277 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC11.82□□□□□ -0.52
CMC4P56277 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CMC4P56277 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC11.82□□□□□ -0.52
CMC4P56277 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CMC4P56277 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CMC4P56277 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC11.82□□□□□ -0.52
CMC4P56277 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CMC4P56277 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CMC4P56277 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC11.81□□□□□ -0.52
CMC4P56277 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CMC4P56277 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC11.81□□□□□ -0.52
CMC4P56277 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CMC4P56277 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CMC4P56277 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CMC4P56277 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
CMC4P56277 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC11.81□□□□□ -0.52
CMC4P56277 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CMC4P56277 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CMC4P56277 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC11.81□□□□□ -0.52
CMC4P56277 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
CMC4P56277 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
CMC4P56277 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CMC4P56277 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CMC4P56277 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
CMC4P56277 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC11.81□□□□□ -0.52
CMC4P56277 ACE-203ENST00000413513 2237 ntTSL 2 BASIC11.81□□□□□ -0.52
CMC4P56277 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC11.81□□□□□ -0.52
CMC4P56277 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CMC4P56277 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
CMC4P56277 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC11.81□□□□□ -0.52
CMC4P56277 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CMC4P56277 AZGP1P1-201ENST00000411909 902 ntBASIC11.81□□□□□ -0.52
CMC4P56277 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC11.81□□□□□ -0.52
CMC4P56277 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC11.81□□□□□ -0.52
CMC4P56277 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC11.81□□□□□ -0.52
CMC4P56277 FAM207CP-201ENST00000443486 507 ntBASIC11.81□□□□□ -0.52
CMC4P56277 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC11.81□□□□□ -0.52
CMC4P56277 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
CMC4P56277 AC004890.2-204ENST00000481968 304 ntBASIC11.81□□□□□ -0.52
CMC4P56277 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC11.81□□□□□ -0.52
CMC4P56277 REEP4-207ENST00000523293 913 ntTSL 3 BASIC11.81□□□□□ -0.52
CMC4P56277 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC11.81□□□□□ -0.52
CMC4P56277 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC11.81□□□□□ -0.52
CMC4P56277 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC11.81□□□□□ -0.52
CMC4P56277 AC010336.2-201ENST00000564226 506 ntBASIC11.81□□□□□ -0.52
CMC4P56277 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC11.81□□□□□ -0.52
CMC4P56277 AL355385.1-201ENST00000606123 409 ntBASIC11.81□□□□□ -0.52
CMC4P56277 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC11.81□□□□□ -0.52
CMC4P56277 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CMC4P56277 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
CMC4P56277 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC11.81□□□□□ -0.52
CMC4P56277 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CMC4P56277 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC11.81□□□□□ -0.52
CMC4P56277 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CMC4P56277 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CMC4P56277 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
CMC4P56277 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC11.81□□□□□ -0.52
CMC4P56277 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC11.81□□□□□ -0.52
CMC4P56277 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
CMC4P56277 AC112504.1-201ENST00000623415 1841 ntBASIC11.81□□□□□ -0.52
CMC4P56277 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CMC4P56277 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CMC4P56277 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
CMC4P56277 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
CMC4P56277 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC11.81□□□□□ -0.52
CMC4P56277 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CMC4P56277 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC11.81□□□□□ -0.52
CMC4P56277 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms