Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
FOXG1P55316 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
FOXG1P55316 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC13.89□□□□□ -0.19
FOXG1P55316 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.89□□□□□ -0.19
FOXG1P55316 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
FOXG1P55316 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
FOXG1P55316 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC13.89□□□□□ -0.19
FOXG1P55316 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
FOXG1P55316 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC13.89□□□□□ -0.19
FOXG1P55316 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
FOXG1P55316 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
FOXG1P55316 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
FOXG1P55316 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
FOXG1P55316 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
FOXG1P55316 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC13.88□□□□□ -0.19
FOXG1P55316 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
FOXG1P55316 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC13.88□□□□□ -0.19
FOXG1P55316 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
FOXG1P55316 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC13.88□□□□□ -0.19
FOXG1P55316 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
FOXG1P55316 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
FOXG1P55316 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.88□□□□□ -0.19
FOXG1P55316 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.88□□□□□ -0.19
FOXG1P55316 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
FOXG1P55316 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.88□□□□□ -0.19
FOXG1P55316 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
FOXG1P55316 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
FOXG1P55316 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.88□□□□□ -0.19
FOXG1P55316 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC13.88□□□□□ -0.19
FOXG1P55316 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
FOXG1P55316 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
FOXG1P55316 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
FOXG1P55316 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
FOXG1P55316 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.88□□□□□ -0.19
FOXG1P55316 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.88□□□□□ -0.19
FOXG1P55316 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
FOXG1P55316 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
FOXG1P55316 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.88□□□□□ -0.19
FOXG1P55316 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
FOXG1P55316 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.88□□□□□ -0.19
FOXG1P55316 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
FOXG1P55316 F11R-206ENST00000621309 4770 ntTSL 5 BASIC13.88□□□□□ -0.19
FOXG1P55316 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
FOXG1P55316 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
FOXG1P55316 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
FOXG1P55316 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
FOXG1P55316 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
FOXG1P55316 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
FOXG1P55316 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC13.88□□□□□ -0.19
FOXG1P55316 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
FOXG1P55316 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
FOXG1P55316 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
FOXG1P55316 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC13.88□□□□□ -0.19
FOXG1P55316 AC009090.5-201ENST00000624886 2285 ntBASIC13.88□□□□□ -0.19
FOXG1P55316 WARS-232ENST00000556645 2508 ntTSL 5 BASIC13.88□□□□□ -0.19
FOXG1P55316 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
FOXG1P55316 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
FOXG1P55316 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
FOXG1P55316 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
FOXG1P55316 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.88□□□□□ -0.19
FOXG1P55316 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
FOXG1P55316 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
FOXG1P55316 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC13.87□□□□□ -0.19
FOXG1P55316 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
FOXG1P55316 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC13.87□□□□□ -0.19
FOXG1P55316 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
FOXG1P55316 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
FOXG1P55316 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC13.87□□□□□ -0.19
FOXG1P55316 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC13.87□□□□□ -0.19
FOXG1P55316 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
FOXG1P55316 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
FOXG1P55316 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
FOXG1P55316 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
FOXG1P55316 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC13.87□□□□□ -0.19
FOXG1P55316 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
FOXG1P55316 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
FOXG1P55316 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
FOXG1P55316 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
FOXG1P55316 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
FOXG1P55316 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
FOXG1P55316 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
FOXG1P55316 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.87□□□□□ -0.19
FOXG1P55316 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
FOXG1P55316 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC13.87□□□□□ -0.19
FOXG1P55316 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC13.87□□□□□ -0.19
FOXG1P55316 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
FOXG1P55316 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.87□□□□□ -0.19
FOXG1P55316 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
FOXG1P55316 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
FOXG1P55316 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC13.87□□□□□ -0.19
FOXG1P55316 API5-211ENST00000534695 560 ntTSL 5 BASIC13.87□□□□□ -0.19
FOXG1P55316 TPRX2P-201ENST00000535362 881 ntBASIC13.87□□□□□ -0.19
FOXG1P55316 TIMM17BP1-201ENST00000545713 516 ntBASIC13.87□□□□□ -0.19
FOXG1P55316 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.87□□□□□ -0.19
FOXG1P55316 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.87□□□□□ -0.19
FOXG1P55316 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
FOXG1P55316 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC13.87□□□□□ -0.19
FOXG1P55316 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC13.87□□□□□ -0.19
FOXG1P55316 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC13.87□□□□□ -0.19
FOXG1P55316 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms