Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AC099568.2-201ENST00000609194 695 ntBASIC17.87■□□□□ 0.45
USP11P51784 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
USP11P51784 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
USP11P51784 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.87■□□□□ 0.45
USP11P51784 SLC7A15P-201ENST00000424028 1363 ntBASIC17.87■□□□□ 0.45
USP11P51784 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
USP11P51784 CROCCP1-201ENST00000426910 5675 ntBASIC17.87■□□□□ 0.45
USP11P51784 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
USP11P51784 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.87■□□□□ 0.45
USP11P51784 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
USP11P51784 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.87■□□□□ 0.45
USP11P51784 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.87■□□□□ 0.45
USP11P51784 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
USP11P51784 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
USP11P51784 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
USP11P51784 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
USP11P51784 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
USP11P51784 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.86■□□□□ 0.45
USP11P51784 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
USP11P51784 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.86■□□□□ 0.45
USP11P51784 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
USP11P51784 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
USP11P51784 PKIG-203ENST00000372887 769 ntTSL 3 BASIC17.86■□□□□ 0.45
USP11P51784 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
USP11P51784 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC17.86■□□□□ 0.45
USP11P51784 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC17.86■□□□□ 0.45
USP11P51784 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC17.86■□□□□ 0.45
USP11P51784 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC17.86■□□□□ 0.45
USP11P51784 POLD4-211ENST00000539074 714 ntTSL 3 BASIC17.86■□□□□ 0.45
USP11P51784 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC17.86■□□□□ 0.45
USP11P51784 RRP7BP-205ENST00000566851 833 ntBASIC17.86■□□□□ 0.45
USP11P51784 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC17.86■□□□□ 0.45
USP11P51784 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
USP11P51784 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC17.86■□□□□ 0.45
USP11P51784 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
USP11P51784 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
USP11P51784 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
USP11P51784 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
USP11P51784 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
USP11P51784 AC007541.1-201ENST00000570282 1469 ntBASIC17.86■□□□□ 0.45
USP11P51784 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.86■□□□□ 0.45
USP11P51784 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
USP11P51784 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
USP11P51784 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
USP11P51784 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
USP11P51784 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
USP11P51784 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
USP11P51784 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
USP11P51784 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.86■□□□□ 0.45
USP11P51784 DKFZP434H168-201ENST00000567381 1905 ntBASIC17.86■□□□□ 0.45
USP11P51784 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
USP11P51784 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
USP11P51784 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
USP11P51784 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
USP11P51784 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
USP11P51784 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
USP11P51784 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
USP11P51784 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
USP11P51784 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
USP11P51784 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
USP11P51784 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
USP11P51784 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
USP11P51784 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
USP11P51784 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
USP11P51784 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
USP11P51784 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
USP11P51784 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
USP11P51784 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
USP11P51784 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
USP11P51784 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC17.85■□□□□ 0.45
USP11P51784 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
USP11P51784 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
USP11P51784 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
USP11P51784 AL133267.1-201ENST00000398220 340 ntBASIC17.85■□□□□ 0.45
USP11P51784 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
USP11P51784 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
USP11P51784 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC17.85■□□□□ 0.45
USP11P51784 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC17.85■□□□□ 0.45
USP11P51784 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC17.85■□□□□ 0.45
USP11P51784 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC17.85■□□□□ 0.45
USP11P51784 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC17.85■□□□□ 0.45
USP11P51784 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC17.85■□□□□ 0.45
USP11P51784 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC17.85■□□□□ 0.45
USP11P51784 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
USP11P51784 TK1-203ENST00000588734 1681 ntTSL 2 BASIC17.85■□□□□ 0.45
USP11P51784 AP003680.1-201ENST00000598970 3660 ntBASIC17.85■□□□□ 0.45
USP11P51784 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC17.85■□□□□ 0.45
USP11P51784 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC17.85■□□□□ 0.45
USP11P51784 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.85■□□□□ 0.45
USP11P51784 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
USP11P51784 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
USP11P51784 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
USP11P51784 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.85■□□□□ 0.45
USP11P51784 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
USP11P51784 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
USP11P51784 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.84■□□□□ 0.45
USP11P51784 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
USP11P51784 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
USP11P51784 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
USP11P51784 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms