Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 OS9-207ENST00000439210 1946 ntTSL 2 BASIC18.62■□□□□ 0.57
MRE11P49959 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MRE11P49959 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC18.62■□□□□ 0.57
MRE11P49959 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
MRE11P49959 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC18.62■□□□□ 0.57
MRE11P49959 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC18.62■□□□□ 0.57
MRE11P49959 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
MRE11P49959 C18orf15-201ENST00000623680 2534 ntBASIC18.62■□□□□ 0.57
MRE11P49959 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MRE11P49959 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MRE11P49959 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MRE11P49959 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
MRE11P49959 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MRE11P49959 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
MRE11P49959 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MRE11P49959 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
MRE11P49959 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MRE11P49959 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MRE11P49959 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MRE11P49959 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
MRE11P49959 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.62■□□□□ 0.57
MRE11P49959 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC18.62■□□□□ 0.57
MRE11P49959 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.62■□□□□ 0.57
MRE11P49959 AC022494.1-201ENST00000466044 728 ntBASIC18.62■□□□□ 0.57
MRE11P49959 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.62■□□□□ 0.57
MRE11P49959 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.62■□□□□ 0.57
MRE11P49959 CFL1-202ENST00000524553 860 ntTSL 2 BASIC18.62■□□□□ 0.57
MRE11P49959 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC18.62■□□□□ 0.57
MRE11P49959 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.62■□□□□ 0.57
MRE11P49959 AF228730.6-201ENST00000641497 218 ntBASIC18.62■□□□□ 0.57
MRE11P49959 AC084121.3-201ENST00000641716 218 ntBASIC18.62■□□□□ 0.57
MRE11P49959 AC105233.6-201ENST00000642093 218 ntBASIC18.62■□□□□ 0.57
MRE11P49959 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.62■□□□□ 0.57
MRE11P49959 AC125634.1-201ENST00000438758 1403 ntBASIC18.62■□□□□ 0.57
MRE11P49959 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MRE11P49959 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MRE11P49959 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MRE11P49959 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MRE11P49959 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC18.62■□□□□ 0.57
MRE11P49959 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MRE11P49959 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC18.62■□□□□ 0.57
MRE11P49959 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC18.62■□□□□ 0.57
MRE11P49959 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MRE11P49959 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC18.62■□□□□ 0.57
MRE11P49959 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MRE11P49959 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
MRE11P49959 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MRE11P49959 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MRE11P49959 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MRE11P49959 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC18.61■□□□□ 0.57
MRE11P49959 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
MRE11P49959 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MRE11P49959 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
MRE11P49959 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
MRE11P49959 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
MRE11P49959 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MRE11P49959 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MRE11P49959 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.61■□□□□ 0.57
MRE11P49959 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC18.61■□□□□ 0.57
MRE11P49959 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
MRE11P49959 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.61■□□□□ 0.57
MRE11P49959 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MRE11P49959 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
MRE11P49959 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC18.61■□□□□ 0.57
MRE11P49959 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
MRE11P49959 POM121L3P-201ENST00000419331 1163 ntBASIC18.61■□□□□ 0.57
MRE11P49959 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC18.61■□□□□ 0.57
MRE11P49959 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.61■□□□□ 0.57
MRE11P49959 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.61■□□□□ 0.57
MRE11P49959 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC18.61■□□□□ 0.57
MRE11P49959 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.61■□□□□ 0.57
MRE11P49959 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.61■□□□□ 0.57
MRE11P49959 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
MRE11P49959 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MRE11P49959 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MRE11P49959 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
MRE11P49959 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
MRE11P49959 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
MRE11P49959 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC18.61■□□□□ 0.57
MRE11P49959 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MRE11P49959 AC117489.1-201ENST00000625169 3217 ntBASIC18.61■□□□□ 0.57
MRE11P49959 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC18.61■□□□□ 0.57
MRE11P49959 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MRE11P49959 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
MRE11P49959 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MRE11P49959 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MRE11P49959 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
MRE11P49959 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.6■□□□□ 0.57
MRE11P49959 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MRE11P49959 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MRE11P49959 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MRE11P49959 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MRE11P49959 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MRE11P49959 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC18.6■□□□□ 0.57
MRE11P49959 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.6■□□□□ 0.57
MRE11P49959 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC18.6■□□□□ 0.57
MRE11P49959 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.6■□□□□ 0.57
MRE11P49959 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
MRE11P49959 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC18.6■□□□□ 0.57
MRE11P49959 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms