Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.03■□□□□ -0
CLK1P49759 PDPK2P-202ENST00000562415 1191 ntBASIC15.03■□□□□ -0
CLK1P49759 AC040169.1-201ENST00000565382 521 ntBASIC15.03■□□□□ -0
CLK1P49759 AL031055.1-201ENST00000606362 631 ntBASIC15.03■□□□□ -0
CLK1P49759 AC020765.3-201ENST00000613051 740 ntBASIC15.03■□□□□ -0
CLK1P49759 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.03■□□□□ -0
CLK1P49759 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.03■□□□□ -0
CLK1P49759 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CLK1P49759 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CLK1P49759 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.03■□□□□ -0
CLK1P49759 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.03■□□□□ -0
CLK1P49759 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CLK1P49759 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.03■□□□□ -0
CLK1P49759 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CLK1P49759 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CLK1P49759 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CLK1P49759 AL512652.2-201ENST00000625156 1716 ntBASIC15.03■□□□□ -0
CLK1P49759 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.03■□□□□ -0
CLK1P49759 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CLK1P49759 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CLK1P49759 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.03■□□□□ -0
CLK1P49759 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.02■□□□□ -0
CLK1P49759 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC15.02■□□□□ -0
CLK1P49759 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLK1P49759 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLK1P49759 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CLK1P49759 AC067750.1-201ENST00000608826 6545 ntBASIC15.02■□□□□ -0
CLK1P49759 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC15.02■□□□□ -0
CLK1P49759 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLK1P49759 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.02■□□□□ -0
CLK1P49759 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.02■□□□□ -0
CLK1P49759 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLK1P49759 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.02■□□□□ -0
CLK1P49759 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLK1P49759 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLK1P49759 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.02■□□□□ -0
CLK1P49759 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.02■□□□□ -0
CLK1P49759 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
CLK1P49759 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.02■□□□□ -0
CLK1P49759 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLK1P49759 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.02■□□□□ -0
CLK1P49759 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.02■□□□□ -0
CLK1P49759 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.02■□□□□ -0
CLK1P49759 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.02■□□□□ -0
CLK1P49759 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.02■□□□□ -0
CLK1P49759 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CLK1P49759 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CLK1P49759 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CLK1P49759 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CLK1P49759 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.02□□□□□ -0.01
CLK1P49759 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CLK1P49759 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC15.02□□□□□ -0.01
CLK1P49759 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CLK1P49759 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CLK1P49759 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLK1P49759 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLK1P49759 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLK1P49759 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CLK1P49759 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLK1P49759 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLK1P49759 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.01□□□□□ -0.01
CLK1P49759 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLK1P49759 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CLK1P49759 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CLK1P49759 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLK1P49759 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLK1P49759 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CLK1P49759 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLK1P49759 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLK1P49759 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CLK1P49759 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CLK1P49759 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CLK1P49759 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLK1P49759 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLK1P49759 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLK1P49759 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CLK1P49759 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLK1P49759 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.01□□□□□ -0.01
CLK1P49759 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.01□□□□□ -0.01
CLK1P49759 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.01□□□□□ -0.01
CLK1P49759 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CLK1P49759 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.01□□□□□ -0.01
CLK1P49759 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
CLK1P49759 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
CLK1P49759 AC018845.2-201ENST00000568326 409 ntBASIC15.01□□□□□ -0.01
CLK1P49759 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLK1P49759 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.01□□□□□ -0.01
CLK1P49759 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.01□□□□□ -0.01
CLK1P49759 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CLK1P49759 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLK1P49759 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CLK1P49759 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.01□□□□□ -0.01
CLK1P49759 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CLK1P49759 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLK1P49759 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.01□□□□□ -0.01
CLK1P49759 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLK1P49759 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CLK1P49759 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
CLK1P49759 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.01□□□□□ -0.01
CLK1P49759 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms