Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.05□□□□□ -0.16
SOX2P48431 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.05□□□□□ -0.16
SOX2P48431 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SOX2P48431 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SOX2P48431 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.05□□□□□ -0.16
SOX2P48431 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SOX2P48431 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SOX2P48431 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SOX2P48431 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SOX2P48431 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SOX2P48431 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.05□□□□□ -0.16
SOX2P48431 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC14.05□□□□□ -0.16
SOX2P48431 AC018712.1-201ENST00000455767 687 ntBASIC14.05□□□□□ -0.16
SOX2P48431 AF186996.4-201ENST00000467186 377 ntBASIC14.05□□□□□ -0.16
SOX2P48431 AC108751.1-201ENST00000490852 363 ntBASIC14.05□□□□□ -0.16
SOX2P48431 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.05□□□□□ -0.16
SOX2P48431 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.05□□□□□ -0.16
SOX2P48431 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.05□□□□□ -0.16
SOX2P48431 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.05□□□□□ -0.16
SOX2P48431 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SOX2P48431 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
SOX2P48431 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC14.05□□□□□ -0.16
SOX2P48431 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
SOX2P48431 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.05□□□□□ -0.16
SOX2P48431 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.05□□□□□ -0.16
SOX2P48431 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SOX2P48431 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
SOX2P48431 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
SOX2P48431 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC14.05□□□□□ -0.16
SOX2P48431 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SOX2P48431 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.05□□□□□ -0.16
SOX2P48431 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.05□□□□□ -0.16
SOX2P48431 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.05□□□□□ -0.16
SOX2P48431 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SOX2P48431 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SOX2P48431 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SOX2P48431 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SOX2P48431 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SOX2P48431 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SOX2P48431 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SOX2P48431 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
SOX2P48431 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SOX2P48431 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SOX2P48431 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.05□□□□□ -0.16
SOX2P48431 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SOX2P48431 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SOX2P48431 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SOX2P48431 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.04□□□□□ -0.16
SOX2P48431 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SOX2P48431 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SOX2P48431 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SOX2P48431 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.04□□□□□ -0.16
SOX2P48431 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
SOX2P48431 RPS2P28-201ENST00000314255 741 ntBASIC14.04□□□□□ -0.16
SOX2P48431 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.04□□□□□ -0.16
SOX2P48431 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.04□□□□□ -0.16
SOX2P48431 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.04□□□□□ -0.16
SOX2P48431 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SOX2P48431 PRSS29P-201ENST00000440800 595 ntBASIC14.04□□□□□ -0.16
SOX2P48431 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.04□□□□□ -0.16
SOX2P48431 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SOX2P48431 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.04□□□□□ -0.16
SOX2P48431 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.04□□□□□ -0.16
SOX2P48431 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.04□□□□□ -0.16
SOX2P48431 AL078644.1-201ENST00000609881 752 ntBASIC14.04□□□□□ -0.16
SOX2P48431 AC148477.8-201ENST00000624298 468 ntBASIC14.04□□□□□ -0.16
SOX2P48431 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.04□□□□□ -0.16
SOX2P48431 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
SOX2P48431 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SOX2P48431 AC009090.5-201ENST00000624886 2285 ntBASIC14.04□□□□□ -0.16
SOX2P48431 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SOX2P48431 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SOX2P48431 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
SOX2P48431 AP001282.1-201ENST00000531301 1499 ntBASIC14.04□□□□□ -0.16
SOX2P48431 C18orf15-201ENST00000623680 2534 ntBASIC14.04□□□□□ -0.16
SOX2P48431 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SOX2P48431 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SOX2P48431 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
SOX2P48431 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.04□□□□□ -0.16
SOX2P48431 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
SOX2P48431 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
SOX2P48431 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.04□□□□□ -0.16
SOX2P48431 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.04□□□□□ -0.16
SOX2P48431 AC073439.1-201ENST00000624121 1774 ntBASIC14.04□□□□□ -0.16
SOX2P48431 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.04□□□□□ -0.16
SOX2P48431 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SOX2P48431 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SOX2P48431 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
SOX2P48431 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.03□□□□□ -0.16
SOX2P48431 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SOX2P48431 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SOX2P48431 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SOX2P48431 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SOX2P48431 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.03□□□□□ -0.16
SOX2P48431 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
SOX2P48431 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
SOX2P48431 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
SOX2P48431 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.03□□□□□ -0.16
SOX2P48431 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SOX2P48431 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms