Protein–RNA interactions for Protein: P47224

RABIF, Guanine nucleotide exchange factor MSS4, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RABIFP47224 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RABIFP47224 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RABIFP47224 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.47■□□□□ 0.07
RABIFP47224 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RABIFP47224 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.47■□□□□ 0.07
RABIFP47224 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RABIFP47224 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
RABIFP47224 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.47■□□□□ 0.07
RABIFP47224 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
RABIFP47224 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC15.47■□□□□ 0.07
RABIFP47224 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RABIFP47224 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RABIFP47224 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC15.47■□□□□ 0.07
RABIFP47224 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RABIFP47224 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
RABIFP47224 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.47■□□□□ 0.07
RABIFP47224 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
RABIFP47224 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
RABIFP47224 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC15.47■□□□□ 0.07
RABIFP47224 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RABIFP47224 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.47■□□□□ 0.07
RABIFP47224 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.47■□□□□ 0.07
RABIFP47224 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RABIFP47224 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RABIFP47224 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RABIFP47224 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RABIFP47224 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RABIFP47224 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.47■□□□□ 0.07
RABIFP47224 AC092364.2-201ENST00000596710 2692 ntBASIC15.47■□□□□ 0.07
RABIFP47224 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.47■□□□□ 0.07
RABIFP47224 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.47■□□□□ 0.07
RABIFP47224 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.47■□□□□ 0.07
RABIFP47224 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RABIFP47224 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
RABIFP47224 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RABIFP47224 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.46■□□□□ 0.07
RABIFP47224 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
RABIFP47224 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RABIFP47224 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RABIFP47224 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.46■□□□□ 0.07
RABIFP47224 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
RABIFP47224 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.46■□□□□ 0.07
RABIFP47224 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
RABIFP47224 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RABIFP47224 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
RABIFP47224 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RABIFP47224 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC15.46■□□□□ 0.07
RABIFP47224 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RABIFP47224 AC124067.4-201ENST00000519691 2379 ntBASIC15.46■□□□□ 0.07
RABIFP47224 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
RABIFP47224 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.46■□□□□ 0.07
RABIFP47224 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RABIFP47224 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC15.46■□□□□ 0.07
RABIFP47224 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
RABIFP47224 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RABIFP47224 KRT223P-202ENST00000449164 1292 ntBASIC15.46■□□□□ 0.07
RABIFP47224 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.46■□□□□ 0.07
RABIFP47224 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC15.46■□□□□ 0.07
RABIFP47224 AC104989.1-201ENST00000519711 778 ntBASIC15.46■□□□□ 0.07
RABIFP47224 AC068587.3-201ENST00000526613 355 ntBASIC15.46■□□□□ 0.07
RABIFP47224 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.46■□□□□ 0.07
RABIFP47224 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.46■□□□□ 0.07
RABIFP47224 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC15.46■□□□□ 0.07
RABIFP47224 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC15.46■□□□□ 0.07
RABIFP47224 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.46■□□□□ 0.07
RABIFP47224 AP001063.1-201ENST00000568332 529 ntBASIC15.46■□□□□ 0.07
RABIFP47224 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.46■□□□□ 0.07
RABIFP47224 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.46■□□□□ 0.07
RABIFP47224 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
RABIFP47224 COX11-210ENST00000639671 696 ntBASIC15.46■□□□□ 0.07
RABIFP47224 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RABIFP47224 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
RABIFP47224 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
RABIFP47224 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.46■□□□□ 0.07
RABIFP47224 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.46■□□□□ 0.07
RABIFP47224 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.46■□□□□ 0.07
RABIFP47224 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.46■□□□□ 0.07
RABIFP47224 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
RABIFP47224 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.46■□□□□ 0.06
RABIFP47224 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
RABIFP47224 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
RABIFP47224 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
RABIFP47224 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
RABIFP47224 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.06
RABIFP47224 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RABIFP47224 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RABIFP47224 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.45■□□□□ 0.06
RABIFP47224 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RABIFP47224 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
RABIFP47224 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RABIFP47224 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RABIFP47224 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
RABIFP47224 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RABIFP47224 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RABIFP47224 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RABIFP47224 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
RABIFP47224 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
RABIFP47224 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
RABIFP47224 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.45■□□□□ 0.06
RABIFP47224 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms